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Cluster: CGMR033142_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_38780 k141_38780_53 54419 55876 - GH13_18
TF k141_38780 k141_38780_54 55893 56882 - LacI
TC k141_38780 k141_38780_55 56879 57727 - 3.A.1.1.45
TC k141_38780 k141_38780_56 57729 58613 - 3.A.1.1.45
NULL(UNKNOWN) k141_38780 k141_38780_57 58681 60018 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_38780 k141_38780_58 60388 61176 - 3.A.1.34.1
TC k141_38780 k141_38780_59 61169 62104 - 3.A.1.34.1
pfam k141_38780 k141_38780_60 62164 63171 - ABC_sub_bind
TC k141_38780 k141_38780_61 63309 64325 - 3.A.1.34.1
Gene ID: k141_38780_53
Type: CAZyme
Location: 54419 - 55876 (-)
Gene ID: k141_38780_54
Type: TF
Location: 55893 - 56882 (-)
Gene ID: k141_38780_55
Type: TC
Location: 56879 - 57727 (-)
Gene ID: k141_38780_56
Type: TC
Location: 57729 - 58613 (-)
Gene ID: k141_38780_57
Type:
Location: 58681 - 60018 (-)
Gene ID: k141_38780_58
Type: TC
Location: 60388 - 61176 (-)
Gene ID: k141_38780_59
Type: TC
Location: 61169 - 62104 (-)
Gene ID: k141_38780_60
Type: pfam
Location: 62164 - 63171 (-)
Gene ID: k141_38780_61
Type: TC
Location: 63309 - 64325 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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