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Cluster: CGMR033142_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_38780 k141_38780_13 13622 14539 + 3.A.1.1.10
TC k141_38780 k141_38780_14 14548 15429 + 3.A.1.1.10
STP k141_38780 k141_38780_15 15462 17078 + SBP_bac_1
TF k141_38780 k141_38780_16 17118 19391 + HTH_AraC
CAZyme k141_38780 k141_38780_17 19369 20415 + GH33
CAZyme k141_38780 k141_38780_18 20415 23450 + GH106
pfam k141_38780 k141_38780_19 23440 23880 + DUF386
TC k141_38780 k141_38780_20 24060 25061 + 2.A.56.1.6
TC k141_38780 k141_38780_21 25135 25638 + 2.A.56.1.3
TC k141_38780 k141_38780_22 25635 26912 + 2.A.56.1.6
pfam k141_38780 k141_38780_23 27026 27949 + DHDPS
TC k141_38780 k141_38780_24 28506 29531 + 2.A.56.1.3
pfam k141_38780 k141_38780_25 29602 30090 + DctQ
TC k141_38780 k141_38780_26 30090 31391 + 2.A.56.1.6
Gene ID: k141_38780_13
Type: TC
Location: 13622 - 14539 (+)
Gene ID: k141_38780_14
Type: TC
Location: 14548 - 15429 (+)
Gene ID: k141_38780_15
Type: STP
Location: 15462 - 17078 (+)
Gene ID: k141_38780_16
Type: TF
Location: 17118 - 19391 (+)
Gene ID: k141_38780_17
Type: CAZyme
Location: 19369 - 20415 (+)
Gene ID: k141_38780_18
Type: CAZyme
Location: 20415 - 23450 (+)
Gene ID: k141_38780_19
Type: pfam
Location: 23440 - 23880 (+)
Gene ID: k141_38780_20
Type: TC
Location: 24060 - 25061 (+)
Gene ID: k141_38780_21
Type: TC
Location: 25135 - 25638 (+)
Gene ID: k141_38780_22
Type: TC
Location: 25635 - 26912 (+)
Gene ID: k141_38780_23
Type: pfam
Location: 27026 - 27949 (+)
Gene ID: k141_38780_24
Type: TC
Location: 28506 - 29531 (+)
Gene ID: k141_38780_25
Type: pfam
Location: 29602 - 30090 (+)
Gene ID: k141_38780_26
Type: TC
Location: 30090 - 31391 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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