Cluster: CGMR033142_CGC18
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 5
- Substrate:
- Genome ID: CGMR033142
- CGC Family ID: CGCFAM_08488
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_86017 | k141_86017_126 | 146132 | 147016 | - | 3.A.1.1.29 |
| TC | k141_86017 | k141_86017_127 | 147034 | 147891 | - | 3.A.1.1.10 |
| TC | k141_86017 | k141_86017_128 | 148018 | 149583 | - | 3.A.1.1.9 |
| pfam | k141_86017 | k141_86017_129 | 149810 | 151903 | + | Hepar_II_III_C |
| sulfatase | k141_86017 | k141_86017_130 | 151900 | 153357 | + | S1_99 |
| CAZyme | k141_86017 | k141_86017_131 | 153366 | 154472 | + | GH88 |
| CAZyme | k141_86017 | k141_86017_132 | 154474 | 156384 | + | PL12 |
| TF | k141_86017 | k141_86017_133 | 156320 | 158587 | - | HTH_AraC |
| TC | k141_86017 | k141_86017_134 | 158801 | 159733 | + | 3.A.1.1.10 |
| TC | k141_86017 | k141_86017_135 | 159747 | 160652 | + | 3.A.1.1.10 |
| STP | k141_86017 | k141_86017_136 | 160678 | 162297 | + | SBP_bac_1 |
| sulfatase | k141_86017 | k141_86017_137 | 162349 | 163815 | + | S1_27;S1_N.C. |
| CAZyme | k141_86017 | k141_86017_138 | 163812 | 165506 | + | GH154 |
| CAZyme | k141_86017 | k141_86017_139 | 165508 | 167265 | + | PL37 |
| CAZyme | k141_86017 | k141_86017_140 | 167262 | 168422 | + | GH88 |
Gene ID: k141_86017_126
Type: TC
Location: 146132 - 147016 (-)
Type: TC
Location: 146132 - 147016 (-)
Gene ID: k141_86017_127
Type: TC
Location: 147034 - 147891 (-)
Type: TC
Location: 147034 - 147891 (-)
Gene ID: k141_86017_128
Type: TC
Location: 148018 - 149583 (-)
Type: TC
Location: 148018 - 149583 (-)
Gene ID: k141_86017_129
Type: pfam
Location: 149810 - 151903 (+)
Type: pfam
Location: 149810 - 151903 (+)
Gene ID: k141_86017_130
Type: sulfatase
Location: 151900 - 153357 (+)
Type: sulfatase
Location: 151900 - 153357 (+)
Gene ID: k141_86017_131
Type: CAZyme
Location: 153366 - 154472 (+)
Type: CAZyme
Location: 153366 - 154472 (+)
Gene ID: k141_86017_132
Type: CAZyme
Location: 154474 - 156384 (+)
Type: CAZyme
Location: 154474 - 156384 (+)
Gene ID: k141_86017_133
Type: TF
Location: 156320 - 158587 (-)
Type: TF
Location: 156320 - 158587 (-)
Gene ID: k141_86017_134
Type: TC
Location: 158801 - 159733 (+)
Type: TC
Location: 158801 - 159733 (+)
Gene ID: k141_86017_135
Type: TC
Location: 159747 - 160652 (+)
Type: TC
Location: 159747 - 160652 (+)
Gene ID: k141_86017_136
Type: STP
Location: 160678 - 162297 (+)
Type: STP
Location: 160678 - 162297 (+)
Gene ID: k141_86017_137
Type: sulfatase
Location: 162349 - 163815 (+)
Type: sulfatase
Location: 162349 - 163815 (+)
Gene ID: k141_86017_138
Type: CAZyme
Location: 163812 - 165506 (+)
Type: CAZyme
Location: 163812 - 165506 (+)
Gene ID: k141_86017_139
Type: CAZyme
Location: 165508 - 167265 (+)
Type: CAZyme
Location: 165508 - 167265 (+)
Gene ID: k141_86017_140
Type: CAZyme
Location: 167262 - 168422 (+)
Type: CAZyme
Location: 167262 - 168422 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Sphaerochaetales
Family
Sphaerochaetaceae
Genus
RUG023
Species
RUG023 sp900315435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.