Cluster: CGMR033142_CGC11
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR033142
- CGC Family ID: CGCFAM_03785
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_230016 | k141_230016_36 | 37981 | 39288 | + | 3.D.6.1.2 |
| TC | k141_230016 | k141_230016_37 | 39285 | 40367 | + | 3.D.6.1.2 |
| pfam | k141_230016 | k141_230016_38 | 40364 | 40936 | + | FMN_bind |
| TC | k141_230016 | k141_230016_39 | 40933 | 41577 | + | 3.D.6.1.2 |
| TC | k141_230016 | k141_230016_40 | 41574 | 42167 | + | 3.D.6.1.2 |
| TC | k141_230016 | k141_230016_41 | 42178 | 42978 | + | 3.D.6.1.3 |
| CAZyme | k141_230016 | k141_230016_42 | 42985 | 44853 | + | GH57 |
| pfam | k141_230016 | k141_230016_43 | 44946 | 46040 | + | RF-1 | PCRF |
| NULL(UNKNOWN) | k141_230016 | k141_230016_44 | 46070 | 47263 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_230016 | k141_230016_45 | 47286 | 48161 | + | 3.A.5.1.1 |
| NULL(UNKNOWN) | k141_230016 | k141_230016_46 | 48163 | 48942 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_230016 | k141_230016_47 | 48939 | 50066 | + | FtsX |
| TC | k141_230016 | k141_230016_48 | 50059 | 50736 | + | 3.A.1.122.15 |
Gene ID: k141_230016_36
Type: TC
Location: 37981 - 39288 (+)
Type: TC
Location: 37981 - 39288 (+)
Gene ID: k141_230016_37
Type: TC
Location: 39285 - 40367 (+)
Type: TC
Location: 39285 - 40367 (+)
Gene ID: k141_230016_38
Type: pfam
Location: 40364 - 40936 (+)
Type: pfam
Location: 40364 - 40936 (+)
Gene ID: k141_230016_39
Type: TC
Location: 40933 - 41577 (+)
Type: TC
Location: 40933 - 41577 (+)
Gene ID: k141_230016_40
Type: TC
Location: 41574 - 42167 (+)
Type: TC
Location: 41574 - 42167 (+)
Gene ID: k141_230016_41
Type: TC
Location: 42178 - 42978 (+)
Type: TC
Location: 42178 - 42978 (+)
Gene ID: k141_230016_42
Type: CAZyme
Location: 42985 - 44853 (+)
Type: CAZyme
Location: 42985 - 44853 (+)
Gene ID: k141_230016_43
Type: pfam
Location: 44946 - 46040 (+)
Type: pfam
Location: 44946 - 46040 (+)
Gene ID: k141_230016_44
Type:
Location: 46070 - 47263 (+)
Type:
Location: 46070 - 47263 (+)
Gene ID: k141_230016_45
Type: TC
Location: 47286 - 48161 (+)
Type: TC
Location: 47286 - 48161 (+)
Gene ID: k141_230016_46
Type:
Location: 48163 - 48942 (+)
Type:
Location: 48163 - 48942 (+)
Gene ID: k141_230016_47
Type: pfam
Location: 48939 - 50066 (+)
Type: pfam
Location: 48939 - 50066 (+)
Gene ID: k141_230016_48
Type: TC
Location: 50059 - 50736 (+)
Type: TC
Location: 50059 - 50736 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Sphaerochaetales
Family
Sphaerochaetaceae
Genus
RUG023
Species
RUG023 sp900315435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.