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Cluster: CGMR032619_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_77559 k141_77559_42 49993 51774 + AA3_2
pfam k141_77559 k141_77559_43 52143 52958 - Lactamase_B_2 | Lactamase_B_3
NULL(UNKNOWN) k141_77559 k141_77559_44 53048 53686 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_77559 k141_77559_45 54262 56331 - CBM61 | GH53
CAZyme k141_77559 k141_77559_46 56362 58149 - CBM13 | GH53
CAZyme k141_77559 k141_77559_47 58222 60246 - GH42
CAZyme k141_77559 k141_77559_48 60335 62041 - GH53
TF k141_77559 k141_77559_49 62110 63087 - LacI
STP k141_77559 k141_77559_50 63274 64845 - SBP_bac_1
TC k141_77559 k141_77559_51 64944 65864 - 3.A.1.1.29
TC k141_77559 k141_77559_52 65876 66811 - 3.A.1.1.10
TC k141_77559 k141_77559_53 67426 68430 - 3.A.1.2.3
TC k141_77559 k141_77559_54 68441 69952 - 3.A.1.2.3
TC k141_77559 k141_77559_55 70017 71933 - 3.A.1.2.3
TC k141_77559 k141_77559_56 72354 73397 - 3.A.1.2.3
STP k141_77559 k141_77559_57 73411 74382 - Peripla_BP_1
TC k141_77559 k141_77559_58 74383 76212 - 9.B.33.1.1
TF k141_77559 k141_77559_59 76209 77828 - HTH_AraC | HTH_AraC
pfam k141_77559 k141_77559_60 78623 79765 + DUF3798
TC k141_77559 k141_77559_61 79854 81455 + 3.A.1.2.26
Gene ID: k141_77559_42
Type: CAZyme
Location: 49993 - 51774 (+)
Gene ID: k141_77559_43
Type: pfam
Location: 52143 - 52958 (-)
Gene ID: k141_77559_44
Type:
Location: 53048 - 53686 (-)
Gene ID: k141_77559_45
Type: CAZyme
Location: 54262 - 56331 (-)
Gene ID: k141_77559_46
Type: CAZyme
Location: 56362 - 58149 (-)
Gene ID: k141_77559_47
Type: CAZyme
Location: 58222 - 60246 (-)
Gene ID: k141_77559_48
Type: CAZyme
Location: 60335 - 62041 (-)
Gene ID: k141_77559_49
Type: TF
Location: 62110 - 63087 (-)
Gene ID: k141_77559_50
Type: STP
Location: 63274 - 64845 (-)
Gene ID: k141_77559_51
Type: TC
Location: 64944 - 65864 (-)
Gene ID: k141_77559_52
Type: TC
Location: 65876 - 66811 (-)
Gene ID: k141_77559_53
Type: TC
Location: 67426 - 68430 (-)
Gene ID: k141_77559_54
Type: TC
Location: 68441 - 69952 (-)
Gene ID: k141_77559_55
Type: TC
Location: 70017 - 71933 (-)
Gene ID: k141_77559_56
Type: TC
Location: 72354 - 73397 (-)
Gene ID: k141_77559_57
Type: STP
Location: 73411 - 74382 (-)
Gene ID: k141_77559_58
Type: TC
Location: 74383 - 76212 (-)
Gene ID: k141_77559_59
Type: TF
Location: 76209 - 77828 (-)
Gene ID: k141_77559_60
Type: pfam
Location: 78623 - 79765 (+)
Gene ID: k141_77559_61
Type: TC
Location: 79854 - 81455 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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