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Cluster: CGMR032619_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_1742 k141_1742_9 12600 13505 + 3.A.1.1.11
TC k141_1742 k141_1742_10 13519 14511 + 3.A.1.1.11
CAZyme k141_1742 k141_1742_11 14535 16163 + CBM65 | CBM65
STP k141_1742 k141_1742_12 16186 17598 + SBP_bac_1
CAZyme k141_1742 k141_1742_13 17747 18769 + GH130_2
pfam k141_1742 k141_1742_14 19042 20766 + PGM_PMM_IV | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III
CAZyme k141_1742 k141_1742_15 20932 23358 + CBM35inCE17 | CE17 | CE17
STP k141_1742 k141_1742_16 23920 25278 + TrkA_C | TrkA_C
TC k141_1742 k141_1742_17 25292 26737 + 2.A.38.1.1
Gene ID: k141_1742_9
Type: TC
Location: 12600 - 13505 (+)
Gene ID: k141_1742_10
Type: TC
Location: 13519 - 14511 (+)
Gene ID: k141_1742_11
Type: CAZyme
Location: 14535 - 16163 (+)
Gene ID: k141_1742_12
Type: STP
Location: 16186 - 17598 (+)
Gene ID: k141_1742_13
Type: CAZyme
Location: 17747 - 18769 (+)
Gene ID: k141_1742_14
Type: pfam
Location: 19042 - 20766 (+)
Gene ID: k141_1742_15
Type: CAZyme
Location: 20932 - 23358 (+)
Gene ID: k141_1742_16
Type: STP
Location: 23920 - 25278 (+)
Gene ID: k141_1742_17
Type: TC
Location: 25292 - 26737 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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