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Cluster: CGMR032619_CGC44

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_39002 k141_39002_31 33858 34913 - GH179
TF k141_39002 k141_39002_32 35240 36025 + HTH_AraC
CAZyme k141_39002 k141_39002_33 36320 37945 - CBM91 | GH43_12
CAZyme k141_39002 k141_39002_34 38177 40327 + GH3
CAZyme k141_39002 k141_39002_35 40420 42408 + GH67
CAZyme k141_39002 k141_39002_36 42625 46203 + GH2
TF k141_39002 k141_39002_37 46325 47281 - HTH_AraC | HTH_AraC
STP k141_39002 k141_39002_38 47939 50848 + SBP_bac_1
TC k141_39002 k141_39002_39 50860 51798 + 3.A.1.1.23
TC k141_39002 k141_39002_40 51824 52690 + 3.A.1.1.39
Gene ID: k141_39002_31
Type: CAZyme
Location: 33858 - 34913 (-)
Gene ID: k141_39002_32
Type: TF
Location: 35240 - 36025 (+)
Gene ID: k141_39002_33
Type: CAZyme
Location: 36320 - 37945 (-)
Gene ID: k141_39002_34
Type: CAZyme
Location: 38177 - 40327 (+)
Gene ID: k141_39002_35
Type: CAZyme
Location: 40420 - 42408 (+)
Gene ID: k141_39002_36
Type: CAZyme
Location: 42625 - 46203 (+)
Gene ID: k141_39002_37
Type: TF
Location: 46325 - 47281 (-)
Gene ID: k141_39002_38
Type: STP
Location: 47939 - 50848 (+)
Gene ID: k141_39002_39
Type: TC
Location: 50860 - 51798 (+)
Gene ID: k141_39002_40
Type: TC
Location: 51824 - 52690 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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