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Cluster: CGMR032619_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_12405 k141_12405_6 4654 6462 - 3.A.1.106.2
TC k141_12405 k141_12405_7 6692 7552 - 3.A.1.1.29
TC k141_12405 k141_12405_8 7562 8509 - 3.A.1.1.10
TC k141_12405 k141_12405_9 8638 10317 - 3.A.1.1.9
TF k141_12405 k141_12405_10 10636 12909 + HTH_AraC
CAZyme k141_12405 k141_12405_11 13143 13862 + CE12
CAZyme k141_12405 k141_12405_12 13919 15826 + CBM91 | GH43_12
CAZyme k141_12405 k141_12405_13 16032 17609 - GH28
CAZyme k141_12405 k141_12405_14 17642 18535 - GH105
Gene ID: k141_12405_6
Type: TC
Location: 4654 - 6462 (-)
Gene ID: k141_12405_7
Type: TC
Location: 6692 - 7552 (-)
Gene ID: k141_12405_8
Type: TC
Location: 7562 - 8509 (-)
Gene ID: k141_12405_9
Type: TC
Location: 8638 - 10317 (-)
Gene ID: k141_12405_10
Type: TF
Location: 10636 - 12909 (+)
Gene ID: k141_12405_11
Type: CAZyme
Location: 13143 - 13862 (+)
Gene ID: k141_12405_12
Type: CAZyme
Location: 13919 - 15826 (+)
Gene ID: k141_12405_13
Type: CAZyme
Location: 16032 - 17609 (-)
Gene ID: k141_12405_14
Type: CAZyme
Location: 17642 - 18535 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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