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Cluster: CGMR032619_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_22119 k141_22119_1 396 2693 + GH127
pfam k141_22119 k141_22119_2 2812 4233 + MFS_1
TC k141_22119 k141_22119_3 4597 5271 + 9.B.18.1.2
pfam k141_22119 k141_22119_4 5268 6095 + 3Beta_HSD | Epimerase | RmlD_sub_bind | NAD_binding_4
CAZyme k141_22119 k141_22119_5 6088 7224 + GT4
pfam k141_22119 k141_22119_6 7260 8117 + 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd
NULL(UNKNOWN) k141_22119 k141_22119_7 8179 8274 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_22119 k141_22119_8 8292 9329 + GT4
CAZyme k141_22119 k141_22119_9 9329 10276 + GT8
TC k141_22119 k141_22119_10 10297 11733 + 3.A.1.103.4
TC k141_22119 k141_22119_11 11753 14107 + 3.A.1.103.1
CAZyme k141_22119 k141_22119_12 14128 16437 + GT4 | GT4
pfam k141_22119 k141_22119_13 16427 17851 + DUF2142
CAZyme k141_22119 k141_22119_14 17897 18598 + GT2
pfam k141_22119 k141_22119_15 18600 18983 + DUF2304
CAZyme k141_22119 k141_22119_16 19005 20198 + GT4
CAZyme k141_22119 k141_22119_17 20200 21267 + GH109
pfam k141_22119 k141_22119_18 21248 21619 + EamA
pfam k141_22119 k141_22119_19 21693 22733 + Acyl_transf_3
TC k141_22119 k141_22119_20 22963 24810 + 9.B.18.2.1
Gene ID: k141_22119_1
Type: CAZyme
Location: 396 - 2693 (+)
Gene ID: k141_22119_2
Type: pfam
Location: 2812 - 4233 (+)
Gene ID: k141_22119_3
Type: TC
Location: 4597 - 5271 (+)
Gene ID: k141_22119_4
Type: pfam
Location: 5268 - 6095 (+)
Gene ID: k141_22119_5
Type: CAZyme
Location: 6088 - 7224 (+)
Gene ID: k141_22119_6
Type: pfam
Location: 7260 - 8117 (+)
Gene ID: k141_22119_7
Type:
Location: 8179 - 8274 (+)
Gene ID: k141_22119_8
Type: CAZyme
Location: 8292 - 9329 (+)
Gene ID: k141_22119_9
Type: CAZyme
Location: 9329 - 10276 (+)
Gene ID: k141_22119_10
Type: TC
Location: 10297 - 11733 (+)
Gene ID: k141_22119_11
Type: TC
Location: 11753 - 14107 (+)
Gene ID: k141_22119_12
Type: CAZyme
Location: 14128 - 16437 (+)
Gene ID: k141_22119_13
Type: pfam
Location: 16427 - 17851 (+)
Gene ID: k141_22119_14
Type: CAZyme
Location: 17897 - 18598 (+)
Gene ID: k141_22119_15
Type: pfam
Location: 18600 - 18983 (+)
Gene ID: k141_22119_16
Type: CAZyme
Location: 19005 - 20198 (+)
Gene ID: k141_22119_17
Type: CAZyme
Location: 20200 - 21267 (+)
Gene ID: k141_22119_18
Type: pfam
Location: 21248 - 21619 (+)
Gene ID: k141_22119_19
Type: pfam
Location: 21693 - 22733 (+)
Gene ID: k141_22119_20
Type: TC
Location: 22963 - 24810 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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