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Cluster: CGMR032619_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_29827 k141_29827_2 1491 2495 + 3.A.1.1.10
TC k141_29827 k141_29827_3 2508 3428 + 3.A.1.1.29
STP k141_29827 k141_29827_4 3494 5212 + SBP_bac_1
CAZyme k141_29827 k141_29827_5 5288 6337 + GH105
CAZyme k141_29827 k141_29827_6 6399 8561 + GH112
CAZyme k141_29827 k141_29827_7 8807 10525 + CE12
TF k141_29827 k141_29827_8 10732 11595 + HTH_AraC | HTH_AraC
STP k141_29827 k141_29827_9 11782 12573 + Nitroreductase
CAZyme k141_29827 k141_29827_10 12566 13537 + GH179
Gene ID: k141_29827_2
Type: TC
Location: 1491 - 2495 (+)
Gene ID: k141_29827_3
Type: TC
Location: 2508 - 3428 (+)
Gene ID: k141_29827_4
Type: STP
Location: 3494 - 5212 (+)
Gene ID: k141_29827_5
Type: CAZyme
Location: 5288 - 6337 (+)
Gene ID: k141_29827_6
Type: CAZyme
Location: 6399 - 8561 (+)
Gene ID: k141_29827_7
Type: CAZyme
Location: 8807 - 10525 (+)
Gene ID: k141_29827_8
Type: TF
Location: 10732 - 11595 (+)
Gene ID: k141_29827_9
Type: STP
Location: 11782 - 12573 (+)
Gene ID: k141_29827_10
Type: CAZyme
Location: 12566 - 13537 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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