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Cluster: CGMR032596_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_176310 k141_176310_42 38873 40558 - 9.B.33.1.1
TF k141_176310 k141_176310_43 40784 41515 + MerR
NULL(UNKNOWN) k141_176310 k141_176310_44 41567 41674 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_176310 k141_176310_45 41655 42386 - 3.A.1.12.15
TC k141_176310 k141_176310_46 42370 43317 - 3.A.1.12.15
TC k141_176310 k141_176310_47 43310 44476 - 3.A.1.12.15
TC k141_176310 k141_176310_48 44492 45409 - 3.A.1.12.15
CAZyme k141_176310 k141_176310_49 45641 47938 - GH3
pfam k141_176310 k141_176310_50 48171 49880 + FAD_binding_4 | Lact-deh-memb
peptidase k141_176310 k141_176310_51 49982 50929 - S11.UPW
TC k141_176310 k141_176310_52 51110 51697 - 9.B.29.3.1
TC k141_176310 k141_176310_53 51938 52507 + 9.B.27.2.7
TC k141_176310 k141_176310_54 52545 53984 - 1.B.17.3.10
Gene ID: k141_176310_42
Type: TC
Location: 38873 - 40558 (-)
Gene ID: k141_176310_43
Type: TF
Location: 40784 - 41515 (+)
Gene ID: k141_176310_44
Type:
Location: 41567 - 41674 (+)
Gene ID: k141_176310_45
Type: TC
Location: 41655 - 42386 (-)
Gene ID: k141_176310_46
Type: TC
Location: 42370 - 43317 (-)
Gene ID: k141_176310_47
Type: TC
Location: 43310 - 44476 (-)
Gene ID: k141_176310_48
Type: TC
Location: 44492 - 45409 (-)
Gene ID: k141_176310_49
Type: CAZyme
Location: 45641 - 47938 (-)
Gene ID: k141_176310_50
Type: pfam
Location: 48171 - 49880 (+)
Gene ID: k141_176310_51
Type: peptidase
Location: 49982 - 50929 (-)
Gene ID: k141_176310_52
Type: TC
Location: 51110 - 51697 (-)
Gene ID: k141_176310_53
Type: TC
Location: 51938 - 52507 (+)
Gene ID: k141_176310_54
Type: TC
Location: 52545 - 53984 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_176310_49 vegetarian > vegan 1.03417 0.02117

🧭 Explore Read Mapping of CGC

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