Cluster: CGMR032596_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR032596
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_127700 | k141_127700_15 | 16391 | 16714 | + | 9.B.32.1.2 |
| TC | k141_127700 | k141_127700_16 | 16720 | 17856 | + | 8.A.1.1.4 |
| TF | k141_127700 | k141_127700_17 | 17873 | 18823 | - | HTH_1 |
| TC | k141_127700 | k141_127700_18 | 18945 | 19685 | + | 9.B.99.1.1 |
| CAZyme | k141_127700 | k141_127700_19 | 19773 | 21728 | - | GH127 |
| TC | k141_127700 | k141_127700_20 | 21739 | 23139 | - | 2.A.2.3.4 |
Gene ID: k141_127700_15
Type: TC
Location: 16391 - 16714 (+)
Type: TC
Location: 16391 - 16714 (+)
Gene ID: k141_127700_16
Type: TC
Location: 16720 - 17856 (+)
Type: TC
Location: 16720 - 17856 (+)
Gene ID: k141_127700_17
Type: TF
Location: 17873 - 18823 (-)
Type: TF
Location: 17873 - 18823 (-)
Gene ID: k141_127700_18
Type: TC
Location: 18945 - 19685 (+)
Type: TC
Location: 18945 - 19685 (+)
Gene ID: k141_127700_19
Type: CAZyme
Location: 19773 - 21728 (-)
Type: CAZyme
Location: 19773 - 21728 (-)
Gene ID: k141_127700_20
Type: TC
Location: 21739 - 23139 (-)
Type: TC
Location: 21739 - 23139 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Species
Citrobacter portucalensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.