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Cluster: CGMR032596_CGC42

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_33142 k141_33142_45 50459 51688 - CE4
pfam k141_33142 k141_33142_46 51750 52190 - EIIA-man
TC k141_33142 k141_33142_47 52294 53064 - 3.A.1.105.17
TC k141_33142 k141_33142_48 53061 53987 - 3.A.1.105.17
TC k141_33142 k141_33142_49 54036 54758 + 2.A.53.3.8
STP k141_33142 k141_33142_50 54829 55365 - Pribosyltran
TC k141_33142 k141_33142_51 55617 57272 - 1.B.52.2.1
CAZyme k141_33142 k141_33142_52 57456 59072 - AA1
TC k141_33142 k141_33142_53 59187 59573 + 8.A.2.1.3
Gene ID: k141_33142_45
Type: CAZyme
Location: 50459 - 51688 (-)
Gene ID: k141_33142_46
Type: pfam
Location: 51750 - 52190 (-)
Gene ID: k141_33142_47
Type: TC
Location: 52294 - 53064 (-)
Gene ID: k141_33142_48
Type: TC
Location: 53061 - 53987 (-)
Gene ID: k141_33142_49
Type: TC
Location: 54036 - 54758 (+)
Gene ID: k141_33142_50
Type: STP
Location: 54829 - 55365 (-)
Gene ID: k141_33142_51
Type: TC
Location: 55617 - 57272 (-)
Gene ID: k141_33142_52
Type: CAZyme
Location: 57456 - 59072 (-)
Gene ID: k141_33142_53
Type: TC
Location: 59187 - 59573 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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