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Cluster: CGMR032596_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_174366 k141_174366_4 2751 3293 - 1.B.68.1.1
STP k141_174366 k141_174366_5 3611 4036 + NUDIX
STP k141_174366 k141_174366_6 4322 5461 + Aminotran_1_2
CAZyme k141_174366 k141_174366_7 5464 6447 + GT2
pfam k141_174366 k141_174366_8 6444 8426 + Formyl_trans_N | 3Beta_HSD | Epimerase | Formyl_trans_C | GDP_Man_Dehyd
pfam k141_174366 k141_174366_9 8423 9325 + Polysacc_deac_1
CAZyme k141_174366 k141_174366_10 9322 10980 + GT83
TC k141_174366 k141_174366_11 10977 11312 + 2.A.7.22.2
TC k141_174366 k141_174366_12 11312 11698 + 2.A.7.22.1
Gene ID: k141_174366_4
Type: TC
Location: 2751 - 3293 (-)
Gene ID: k141_174366_5
Type: STP
Location: 3611 - 4036 (+)
Gene ID: k141_174366_6
Type: STP
Location: 4322 - 5461 (+)
Gene ID: k141_174366_7
Type: CAZyme
Location: 5464 - 6447 (+)
Gene ID: k141_174366_8
Type: pfam
Location: 6444 - 8426 (+)
Gene ID: k141_174366_9
Type: pfam
Location: 8423 - 9325 (+)
Gene ID: k141_174366_10
Type: CAZyme
Location: 9322 - 10980 (+)
Gene ID: k141_174366_11
Type: TC
Location: 10977 - 11312 (+)
Gene ID: k141_174366_12
Type: TC
Location: 11312 - 11698 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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