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Cluster: CGMR032596_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_103260 k141_103260_15 13721 15112 + 2.A.23.1.8
pfam k141_103260 k141_103260_16 15632 17890 + Catalase | Catalase-rel | Catalase_C
pfam k141_103260 k141_103260_17 17928 18686 - YdjC
CAZyme k141_103260 k141_103260_18 18699 20054 - GH4
TF k141_103260 k141_103260_19 20179 21018 - HTH_AraC | HTH_AraC
TC k141_103260 k141_103260_20 21032 21379 - 4.A.3.2.1
TC k141_103260 k141_103260_21 21434 22792 - 4.A.3.2.1
TC k141_103260 k141_103260_22 22880 23200 - 4.A.3.2.7
Gene ID: k141_103260_15
Type: TC
Location: 13721 - 15112 (+)
Gene ID: k141_103260_16
Type: pfam
Location: 15632 - 17890 (+)
Gene ID: k141_103260_17
Type: pfam
Location: 17928 - 18686 (-)
Gene ID: k141_103260_18
Type: CAZyme
Location: 18699 - 20054 (-)
Gene ID: k141_103260_19
Type: TF
Location: 20179 - 21018 (-)
Gene ID: k141_103260_20
Type: TC
Location: 21032 - 21379 (-)
Gene ID: k141_103260_21
Type: TC
Location: 21434 - 22792 (-)
Gene ID: k141_103260_22
Type: TC
Location: 22880 - 23200 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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