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Cluster: CGMR032297_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_68871 k141_68871_2 1162 2721 - GT83
pfam k141_68871 k141_68871_3 2766 3683 - 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | NAD_binding_10 | GDP_Man_Dehyd
TC k141_68871 k141_68871_4 3749 4774 - 4.D.2.1.4
pfam k141_68871 k141_68871_5 4771 5625 - YdjC
pfam k141_68871 k141_68871_6 5628 6557 - RNase_HII
TC k141_68871 k141_68871_7 6572 9655 - 2.A.6.3.1
TC k141_68871 k141_68871_8 9658 10776 - 2.A.6.1.5
pfam k141_68871 k141_68871_9 11010 11645 - Fic
peptidase k141_68871 k141_68871_10 11655 12908 - M20.UPB
TC k141_68871 k141_68871_11 13067 14617 - 2.A.68.1.2
Gene ID: k141_68871_2
Type: CAZyme
Location: 1162 - 2721 (-)
Gene ID: k141_68871_3
Type: pfam
Location: 2766 - 3683 (-)
Gene ID: k141_68871_4
Type: TC
Location: 3749 - 4774 (-)
Gene ID: k141_68871_5
Type: pfam
Location: 4771 - 5625 (-)
Gene ID: k141_68871_6
Type: pfam
Location: 5628 - 6557 (-)
Gene ID: k141_68871_7
Type: TC
Location: 6572 - 9655 (-)
Gene ID: k141_68871_8
Type: TC
Location: 9658 - 10776 (-)
Gene ID: k141_68871_9
Type: pfam
Location: 11010 - 11645 (-)
Gene ID: k141_68871_10
Type: peptidase
Location: 11655 - 12908 (-)
Gene ID: k141_68871_11
Type: TC
Location: 13067 - 14617 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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