Cluster: CGMR032224_CGC7
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR032224
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_145281 | k141_145281_45 | 36563 | 38746 | - | GH65 |
| CAZyme | k141_145281 | k141_145281_46 | 38739 | 41033 | - | GH65 |
| TC | k141_145281 | k141_145281_47 | 41044 | 41940 | - | 3.A.1.1.6 |
| TC | k141_145281 | k141_145281_48 | 41957 | 42853 | - | 3.A.1.1.20 |
| STP | k141_145281 | k141_145281_49 | 42972 | 44435 | - | SBP_bac_1 |
| TC | k141_145281 | k141_145281_50 | 44670 | 45314 | - | 2.A.38.4.6 |
| TC | k141_145281 | k141_145281_51 | 45326 | 46702 | - | 2.A.38.4.1 |
| pfam | k141_145281 | k141_145281_52 | 46708 | 47364 | - | Hydrolase | HAD | Hydrolase_like | HAD_2 |
| pfam | k141_145281 | k141_145281_53 | 47351 | 48073 | - | ACPS | AASDHPPT_N |
| TC | k141_145281 | k141_145281_54 | 48085 | 48891 | - | 3.A.1.141.1 |
| pfam | k141_145281 | k141_145281_55 | 48896 | 49723 | - | ABC2_membrane_6 |
| TC | k141_145281 | k141_145281_56 | 49720 | 50766 | - | 3.A.1.141.1 |
Gene ID: k141_145281_45
Type: CAZyme
Location: 36563 - 38746 (-)
Type: CAZyme
Location: 36563 - 38746 (-)
Gene ID: k141_145281_46
Type: CAZyme
Location: 38739 - 41033 (-)
Type: CAZyme
Location: 38739 - 41033 (-)
Gene ID: k141_145281_47
Type: TC
Location: 41044 - 41940 (-)
Type: TC
Location: 41044 - 41940 (-)
Gene ID: k141_145281_48
Type: TC
Location: 41957 - 42853 (-)
Type: TC
Location: 41957 - 42853 (-)
Gene ID: k141_145281_49
Type: STP
Location: 42972 - 44435 (-)
Type: STP
Location: 42972 - 44435 (-)
Gene ID: k141_145281_50
Type: TC
Location: 44670 - 45314 (-)
Type: TC
Location: 44670 - 45314 (-)
Gene ID: k141_145281_51
Type: TC
Location: 45326 - 46702 (-)
Type: TC
Location: 45326 - 46702 (-)
Gene ID: k141_145281_52
Type: pfam
Location: 46708 - 47364 (-)
Type: pfam
Location: 46708 - 47364 (-)
Gene ID: k141_145281_53
Type: pfam
Location: 47351 - 48073 (-)
Type: pfam
Location: 47351 - 48073 (-)
Gene ID: k141_145281_54
Type: TC
Location: 48085 - 48891 (-)
Type: TC
Location: 48085 - 48891 (-)
Gene ID: k141_145281_55
Type: pfam
Location: 48896 - 49723 (-)
Type: pfam
Location: 48896 - 49723 (-)
Gene ID: k141_145281_56
Type: TC
Location: 49720 - 50766 (-)
Type: TC
Location: 49720 - 50766 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia_C
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.