Cluster: CGMR032224_CGC36
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR032224
- CGC Family ID: CGCFAM_00121
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_421605 | k141_421605_3 | 3424 | 5820 | + | GH94 |
| pfam | k141_421605 | k141_421605_4 | 5842 | 7254 | + | PGM_PMM_IV | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III |
| TC | k141_421605 | k141_421605_5 | 7462 | 9294 | + | 8.A.59.2.1 |
| STP | k141_421605 | k141_421605_6 | 9508 | 10869 | + | SBP_bac_1 |
| TC | k141_421605 | k141_421605_7 | 11002 | 11925 | + | 3.A.1.1.4 |
| TC | k141_421605 | k141_421605_8 | 11903 | 12757 | + | 3.A.1.1.18 |
Gene ID: k141_421605_3
Type: CAZyme
Location: 3424 - 5820 (+)
Type: CAZyme
Location: 3424 - 5820 (+)
Gene ID: k141_421605_4
Type: pfam
Location: 5842 - 7254 (+)
Type: pfam
Location: 5842 - 7254 (+)
Gene ID: k141_421605_5
Type: TC
Location: 7462 - 9294 (+)
Type: TC
Location: 7462 - 9294 (+)
Gene ID: k141_421605_6
Type: STP
Location: 9508 - 10869 (+)
Type: STP
Location: 9508 - 10869 (+)
Gene ID: k141_421605_7
Type: TC
Location: 11002 - 11925 (+)
Type: TC
Location: 11002 - 11925 (+)
Gene ID: k141_421605_8
Type: TC
Location: 11903 - 12757 (+)
Type: TC
Location: 11903 - 12757 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia_C
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.