Cluster: CGMR032224_CGC35
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR032224
- CGC Family ID: CGCFAM_00500
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_118418 | k141_118418_66 | 88541 | 89224 | + | GT26 |
| pfam | k141_118418 | k141_118418_67 | 89225 | 90091 | + | YitT_membrane | DUF2179 |
| pfam | k141_118418 | k141_118418_68 | 90243 | 91331 | + | HTH_30 | GGDEF_2 |
| TC | k141_118418 | k141_118418_69 | 91341 | 92015 | + | 3.A.1.140.1 |
Gene ID: k141_118418_66
Type: CAZyme
Location: 88541 - 89224 (+)
Type: CAZyme
Location: 88541 - 89224 (+)
Gene ID: k141_118418_67
Type: pfam
Location: 89225 - 90091 (+)
Type: pfam
Location: 89225 - 90091 (+)
Gene ID: k141_118418_68
Type: pfam
Location: 90243 - 91331 (+)
Type: pfam
Location: 90243 - 91331 (+)
Gene ID: k141_118418_69
Type: TC
Location: 91341 - 92015 (+)
Type: TC
Location: 91341 - 92015 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia_C
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.