Cluster: CGMR032224_CGC33
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR032224
- CGC Family ID: CGCFAM_00710
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_118418 | k141_118418_30 | 38432 | 39790 | + | 2.A.45.2.2 |
| pfam | k141_118418 | k141_118418_31 | 39810 | 40403 | + | Cytidylate_kin2 |
| TC | k141_118418 | k141_118418_32 | 40599 | 42968 | + | 1.B.52.2.2 |
| CAZyme | k141_118418 | k141_118418_33 | 42991 | 45693 | + | GH94 |
| CAZyme | k141_118418 | k141_118418_34 | 45711 | 48818 | + | GH161 |
| CAZyme | k141_118418 | k141_118418_35 | 48830 | 50161 | + | GH30_1 |
| STP | k141_118418 | k141_118418_36 | 50344 | 51762 | + | SBP_bac_1 |
| TC | k141_118418 | k141_118418_37 | 51831 | 52751 | + | 3.A.1.1.23 |
| TC | k141_118418 | k141_118418_38 | 52755 | 53591 | + | 3.A.1.1.36 |
| NULL(UNKNOWN) | k141_118418 | k141_118418_39 | 53719 | 54153 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | k141_118418 | k141_118418_40 | 54165 | 55781 | + | SBP_bac_1 |
| TC | k141_118418 | k141_118418_41 | 55782 | 57617 | + | 8.A.59.2.1 |
Gene ID: k141_118418_30
Type: TC
Location: 38432 - 39790 (+)
Type: TC
Location: 38432 - 39790 (+)
Gene ID: k141_118418_31
Type: pfam
Location: 39810 - 40403 (+)
Type: pfam
Location: 39810 - 40403 (+)
Gene ID: k141_118418_32
Type: TC
Location: 40599 - 42968 (+)
Type: TC
Location: 40599 - 42968 (+)
Gene ID: k141_118418_33
Type: CAZyme
Location: 42991 - 45693 (+)
Type: CAZyme
Location: 42991 - 45693 (+)
Gene ID: k141_118418_34
Type: CAZyme
Location: 45711 - 48818 (+)
Type: CAZyme
Location: 45711 - 48818 (+)
Gene ID: k141_118418_35
Type: CAZyme
Location: 48830 - 50161 (+)
Type: CAZyme
Location: 48830 - 50161 (+)
Gene ID: k141_118418_36
Type: STP
Location: 50344 - 51762 (+)
Type: STP
Location: 50344 - 51762 (+)
Gene ID: k141_118418_37
Type: TC
Location: 51831 - 52751 (+)
Type: TC
Location: 51831 - 52751 (+)
Gene ID: k141_118418_38
Type: TC
Location: 52755 - 53591 (+)
Type: TC
Location: 52755 - 53591 (+)
Gene ID: k141_118418_39
Type:
Location: 53719 - 54153 (+)
Type:
Location: 53719 - 54153 (+)
Gene ID: k141_118418_40
Type: STP
Location: 54165 - 55781 (+)
Type: STP
Location: 54165 - 55781 (+)
Gene ID: k141_118418_41
Type: TC
Location: 55782 - 57617 (+)
Type: TC
Location: 55782 - 57617 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia_C
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.