Cluster: CGMR032224_CGC27
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR032224
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_66621 | k141_66621_15 | 13198 | 13944 | + | 3.A.1.15.14 |
| TC | k141_66621 | k141_66621_16 | 13941 | 14756 | + | 3.A.1.15.13 |
| pfam | k141_66621 | k141_66621_17 | 14757 | 16031 | - | IMS | IMS_HHH | IMS_C |
| pfam | k141_66621 | k141_66621_18 | 16162 | 16842 | + | MecA |
| CAZyme | k141_66621 | k141_66621_19 | 16931 | 18241 | - | GH13_20 |
| TC | k141_66621 | k141_66621_20 | 18389 | 19894 | + | 1.B.52.2.2 |
Gene ID: k141_66621_15
Type: TC
Location: 13198 - 13944 (+)
Type: TC
Location: 13198 - 13944 (+)
Gene ID: k141_66621_16
Type: TC
Location: 13941 - 14756 (+)
Type: TC
Location: 13941 - 14756 (+)
Gene ID: k141_66621_17
Type: pfam
Location: 14757 - 16031 (-)
Type: pfam
Location: 14757 - 16031 (-)
Gene ID: k141_66621_18
Type: pfam
Location: 16162 - 16842 (+)
Type: pfam
Location: 16162 - 16842 (+)
Gene ID: k141_66621_19
Type: CAZyme
Location: 16931 - 18241 (-)
Type: CAZyme
Location: 16931 - 18241 (-)
Gene ID: k141_66621_20
Type: TC
Location: 18389 - 19894 (+)
Type: TC
Location: 18389 - 19894 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia_C
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.