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Cluster: CGMR032224_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_396539 k141_396539_18 17572 19029 + GT5
pfam k141_396539 k141_396539_19 19033 19914 - DUF5688
TC k141_396539 k141_396539_20 20076 21128 - 3.A.1.11.7
TC k141_396539 k141_396539_21 21128 21922 - 3.A.1.11.7
TC k141_396539 k141_396539_22 21916 22743 - 3.A.1.11.1
TC k141_396539 k141_396539_23 22736 23809 - 3.A.1.11.8
TF k141_396539 k141_396539_24 23820 24359 - HTH_3
NULL(UNKNOWN) k141_396539 k141_396539_25 24736 25179 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_396539 k141_396539_26 25324 26688 + 2.A.66.1.33
Gene ID: k141_396539_18
Type: CAZyme
Location: 17572 - 19029 (+)
Gene ID: k141_396539_19
Type: pfam
Location: 19033 - 19914 (-)
Gene ID: k141_396539_20
Type: TC
Location: 20076 - 21128 (-)
Gene ID: k141_396539_21
Type: TC
Location: 21128 - 21922 (-)
Gene ID: k141_396539_22
Type: TC
Location: 21916 - 22743 (-)
Gene ID: k141_396539_23
Type: TC
Location: 22736 - 23809 (-)
Gene ID: k141_396539_24
Type: TF
Location: 23820 - 24359 (-)
Gene ID: k141_396539_25
Type:
Location: 24736 - 25179 (+)
Gene ID: k141_396539_26
Type: TC
Location: 25324 - 26688 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
Roseburia_C
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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