Cluster: CGMR032224_CGC2
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR032224
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_255229 | k141_255229_96 | 104186 | 106735 | + | GH3 |
| NULL(UNKNOWN) | k141_255229 | k141_255229_97 | 106799 | 107602 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_255229 | k141_255229_98 | 107646 | 108140 | - | Sod_Cu |
| TC | k141_255229 | k141_255229_99 | 108316 | 109671 | + | 2.A.38.1.1 |
| TC | k141_255229 | k141_255229_100 | 109681 | 111141 | + | 2.A.38.1.5 |
| NULL(UNKNOWN) | k141_255229 | k141_255229_101 | 111191 | 111610 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_255229 | k141_255229_102 | 111623 | 113257 | + | 2.A.58.2.2 |
Gene ID: k141_255229_96
Type: CAZyme
Location: 104186 - 106735 (+)
Type: CAZyme
Location: 104186 - 106735 (+)
Gene ID: k141_255229_97
Type:
Location: 106799 - 107602 (+)
Type:
Location: 106799 - 107602 (+)
Gene ID: k141_255229_98
Type: pfam
Location: 107646 - 108140 (-)
Type: pfam
Location: 107646 - 108140 (-)
Gene ID: k141_255229_99
Type: TC
Location: 108316 - 109671 (+)
Type: TC
Location: 108316 - 109671 (+)
Gene ID: k141_255229_100
Type: TC
Location: 109681 - 111141 (+)
Type: TC
Location: 109681 - 111141 (+)
Gene ID: k141_255229_101
Type:
Location: 111191 - 111610 (+)
Type:
Location: 111191 - 111610 (+)
Gene ID: k141_255229_102
Type: TC
Location: 111623 - 113257 (+)
Type: TC
Location: 111623 - 113257 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia_C
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.