Cluster: CGMR032224_CGC14
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR032224
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_108631 | k141_108631_13 | 9112 | 11208 | + | GH13_11 |
| pfam | k141_108631 | k141_108631_14 | 11205 | 11855 | - | ECF-ribofla_trS | ECF_trnsprt |
| pfam | k141_108631 | k141_108631_15 | 11935 | 13077 | + | PGA_cap |
| TC | k141_108631 | k141_108631_16 | 13173 | 15263 | + | 4.A.1.1.9 |
| peptidase | k141_108631 | k141_108631_17 | 15260 | 17071 | + | S08.114 |
| TC | k141_108631 | k141_108631_18 | 17185 | 18543 | + | 2.A.66.1.33 |
Gene ID: k141_108631_13
Type: CAZyme
Location: 9112 - 11208 (+)
Type: CAZyme
Location: 9112 - 11208 (+)
Gene ID: k141_108631_14
Type: pfam
Location: 11205 - 11855 (-)
Type: pfam
Location: 11205 - 11855 (-)
Gene ID: k141_108631_15
Type: pfam
Location: 11935 - 13077 (+)
Type: pfam
Location: 11935 - 13077 (+)
Gene ID: k141_108631_16
Type: TC
Location: 13173 - 15263 (+)
Type: TC
Location: 13173 - 15263 (+)
Gene ID: k141_108631_17
Type: peptidase
Location: 15260 - 17071 (+)
Type: peptidase
Location: 15260 - 17071 (+)
Gene ID: k141_108631_18
Type: TC
Location: 17185 - 18543 (+)
Type: TC
Location: 17185 - 18543 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia_C
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.