Cluster: CGMR032224_CGC11
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR032224
- CGC Family ID: CGCFAM_08475
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_150950 | k141_150950_94 | 102829 | 104694 | + | 9.B.18.2.1 |
| STP | k141_150950 | k141_150950_95 | 104709 | 105965 | + | Aminotran_1_2 |
| TC | k141_150950 | k141_150950_96 | 105974 | 106630 | + | 9.B.18.1.2 |
| pfam | k141_150950 | k141_150950_97 | 106690 | 107907 | + | Orn_DAP_Arg_deC | Orn_Arg_deC_N |
| pfam | k141_150950 | k141_150950_98 | 107904 | 108893 | + | ATP-grasp_3 | RimK | ATPgrasp_Ter | PylC-like_N |
| CAZyme | k141_150950 | k141_150950_99 | 108897 | 110162 | + | GT4 |
| pfam | k141_150950 | k141_150950_100 | 110168 | 110677 | + | Hexapep |
| pfam | k141_150950 | k141_150950_101 | 110694 | 112007 | + | UDPG_MGDP_dh | NAD_binding_2 | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N |
| CAZyme | k141_150950 | k141_150950_102 | 112018 | 113091 | + | GH177 |
| pfam | k141_150950 | k141_150950_103 | 113091 | 113651 | + | Hexapep | Hexapep_2 | Hexapep_2 |
| CAZyme | k141_150950 | k141_150950_104 | 113664 | 114656 | + | GH109 |
Gene ID: k141_150950_94
Type: TC
Location: 102829 - 104694 (+)
Type: TC
Location: 102829 - 104694 (+)
Gene ID: k141_150950_95
Type: STP
Location: 104709 - 105965 (+)
Type: STP
Location: 104709 - 105965 (+)
Gene ID: k141_150950_96
Type: TC
Location: 105974 - 106630 (+)
Type: TC
Location: 105974 - 106630 (+)
Gene ID: k141_150950_97
Type: pfam
Location: 106690 - 107907 (+)
Type: pfam
Location: 106690 - 107907 (+)
Gene ID: k141_150950_98
Type: pfam
Location: 107904 - 108893 (+)
Type: pfam
Location: 107904 - 108893 (+)
Gene ID: k141_150950_99
Type: CAZyme
Location: 108897 - 110162 (+)
Type: CAZyme
Location: 108897 - 110162 (+)
Gene ID: k141_150950_100
Type: pfam
Location: 110168 - 110677 (+)
Type: pfam
Location: 110168 - 110677 (+)
Gene ID: k141_150950_101
Type: pfam
Location: 110694 - 112007 (+)
Type: pfam
Location: 110694 - 112007 (+)
Gene ID: k141_150950_102
Type: CAZyme
Location: 112018 - 113091 (+)
Type: CAZyme
Location: 112018 - 113091 (+)
Gene ID: k141_150950_103
Type: pfam
Location: 113091 - 113651 (+)
Type: pfam
Location: 113091 - 113651 (+)
Gene ID: k141_150950_104
Type: CAZyme
Location: 113664 - 114656 (+)
Type: CAZyme
Location: 113664 - 114656 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia_C
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.