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Cluster: CGMR032224_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_150950 k141_150950_76 76591 77952 + 9.B.18.1.3
TC k141_150950 k141_150950_77 77981 79399 + 2.A.47.1.13
TC k141_150950 k141_150950_78 79528 81123 + 2.A.50.2.1
NULL(UNKNOWN) k141_150950 k141_150950_79 81133 82194 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_150950 k141_150950_80 82212 83672 + 4.C.1.1.7
pfam k141_150950 k141_150950_81 83688 83915 + PP-binding
CAZyme k141_150950 k141_150950_82 84017 84823 + GT2
TC k141_150950 k141_150950_83 84841 85617 + 3.A.1.103.1
TC k141_150950 k141_150950_84 85633 86370 + 3.A.1.103.5
pfam k141_150950 k141_150950_85 86387 87541 + Glyphos_transf
pfam k141_150950 k141_150950_86 87543 87932 + CTP_transf_like
CAZyme k141_150950 k141_150950_87 87932 90319 + GT4
STP k141_150950 k141_150950_88 90340 91482 + Fer4
CAZyme k141_150950 k141_150950_89 91507 93930 + GT4
Gene ID: k141_150950_76
Type: TC
Location: 76591 - 77952 (+)
Gene ID: k141_150950_77
Type: TC
Location: 77981 - 79399 (+)
Gene ID: k141_150950_78
Type: TC
Location: 79528 - 81123 (+)
Gene ID: k141_150950_79
Type:
Location: 81133 - 82194 (+)
Gene ID: k141_150950_80
Type: TC
Location: 82212 - 83672 (+)
Gene ID: k141_150950_81
Type: pfam
Location: 83688 - 83915 (+)
Gene ID: k141_150950_82
Type: CAZyme
Location: 84017 - 84823 (+)
Gene ID: k141_150950_83
Type: TC
Location: 84841 - 85617 (+)
Gene ID: k141_150950_84
Type: TC
Location: 85633 - 86370 (+)
Gene ID: k141_150950_85
Type: pfam
Location: 86387 - 87541 (+)
Gene ID: k141_150950_86
Type: pfam
Location: 87543 - 87932 (+)
Gene ID: k141_150950_87
Type: CAZyme
Location: 87932 - 90319 (+)
Gene ID: k141_150950_88
Type: STP
Location: 90340 - 91482 (+)
Gene ID: k141_150950_89
Type: CAZyme
Location: 91507 - 93930 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
Roseburia_C
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_150950_86 vegetarian > omnivore 1.51047 0.00290

🧭 Explore Read Mapping of CGC

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