Cluster: CGMR032037_CGC9
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 5
- Substrate:
- Genome ID: CGMR032037
- CGC Family ID: CGCFAM_00003
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_21143 | k141_21143_49 | 46053 | 49295 | - | GT2 |
| TF | k141_21143 | k141_21143_50 | 49310 | 49606 | - | Whib |
| NULL(UNKNOWN) | k141_21143 | k141_21143_51 | 49744 | 50592 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_21143 | k141_21143_52 | 50614 | 51561 | - | GT2 |
| pfam | k141_21143 | k141_21143_53 | 51565 | 52572 | - | 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | NAD_binding_10 | GDP_Man_Dehyd |
| NULL(UNKNOWN) | k141_21143 | k141_21143_54 | 52629 | 52901 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_21143 | k141_21143_55 | 52770 | 53741 | - | GT2 |
| TC | k141_21143 | k141_21143_56 | 53734 | 54924 | - | 3.A.1.103.4 |
| TC | k141_21143 | k141_21143_57 | 54927 | 55844 | - | 3.A.1.103.1 |
| CAZyme | k141_21143 | k141_21143_58 | 55921 | 56871 | - | GT2 |
| pfam | k141_21143 | k141_21143_59 | 56861 | 57784 | - | 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_10 | GDP_Man_Dehyd |
| CAZyme | k141_21143 | k141_21143_60 | 57777 | 59051 | - | GT4 |
Gene ID: k141_21143_49
Type: CAZyme
Location: 46053 - 49295 (-)
Type: CAZyme
Location: 46053 - 49295 (-)
Gene ID: k141_21143_50
Type: TF
Location: 49310 - 49606 (-)
Type: TF
Location: 49310 - 49606 (-)
Gene ID: k141_21143_51
Type:
Location: 49744 - 50592 (+)
Type:
Location: 49744 - 50592 (+)
Gene ID: k141_21143_52
Type: CAZyme
Location: 50614 - 51561 (-)
Type: CAZyme
Location: 50614 - 51561 (-)
Gene ID: k141_21143_53
Type: pfam
Location: 51565 - 52572 (-)
Type: pfam
Location: 51565 - 52572 (-)
Gene ID: k141_21143_54
Type:
Location: 52629 - 52901 (+)
Type:
Location: 52629 - 52901 (+)
Gene ID: k141_21143_55
Type: CAZyme
Location: 52770 - 53741 (-)
Type: CAZyme
Location: 52770 - 53741 (-)
Gene ID: k141_21143_56
Type: TC
Location: 53734 - 54924 (-)
Type: TC
Location: 53734 - 54924 (-)
Gene ID: k141_21143_57
Type: TC
Location: 54927 - 55844 (-)
Type: TC
Location: 54927 - 55844 (-)
Gene ID: k141_21143_58
Type: CAZyme
Location: 55921 - 56871 (-)
Type: CAZyme
Location: 55921 - 56871 (-)
Gene ID: k141_21143_59
Type: pfam
Location: 56861 - 57784 (-)
Type: pfam
Location: 56861 - 57784 (-)
Gene ID: k141_21143_60
Type: CAZyme
Location: 57777 - 59051 (-)
Type: CAZyme
Location: 57777 - 59051 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Pauljensenia
Species
Pauljensenia turicensis_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.