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Cluster: CGMR032037_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_21143 k141_21143_72 72277 73161 - GT2
pfam k141_21143 k141_21143_73 73350 74216 + 3Beta_HSD | Epimerase
TC k141_21143 k141_21143_74 74281 75207 - 2.A.7.18.1
TF k141_21143 k141_21143_75 75222 77015 - 0040266
pfam k141_21143 k141_21143_76 77184 78476 - UDPG_MGDP_dh | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N
CAZyme k141_21143 k141_21143_77 78599 79747 + GT4
CAZyme k141_21143 k141_21143_78 79814 80848 - GT4
pfam k141_21143 k141_21143_79 81022 82464 + Polysacc_synt_3
CAZyme k141_21143 k141_21143_80 82461 83624 + GT4
Gene ID: k141_21143_72
Type: CAZyme
Location: 72277 - 73161 (-)
Gene ID: k141_21143_73
Type: pfam
Location: 73350 - 74216 (+)
Gene ID: k141_21143_74
Type: TC
Location: 74281 - 75207 (-)
Gene ID: k141_21143_75
Type: TF
Location: 75222 - 77015 (-)
Gene ID: k141_21143_76
Type: pfam
Location: 77184 - 78476 (-)
Gene ID: k141_21143_77
Type: CAZyme
Location: 78599 - 79747 (+)
Gene ID: k141_21143_78
Type: CAZyme
Location: 79814 - 80848 (-)
Gene ID: k141_21143_79
Type: pfam
Location: 81022 - 82464 (+)
Gene ID: k141_21143_80
Type: CAZyme
Location: 82461 - 83624 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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