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Cluster: CGMR031366_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_15048 k141_15048_3 1413 2525 + GT4
pfam k141_15048 k141_15048_4 2549 3157 + VTT_dom
TC k141_15048 k141_15048_5 3234 4622 - 4.A.1.1.5
TF k141_15048 k141_15048_6 4798 5523 + GntR
TC k141_15048 k141_15048_7 5520 5768 + 4.A.1.1.3
TC k141_15048 k141_15048_8 5898 6128 + 4.A.1.1.5
TC k141_15048 k141_15048_9 6128 6622 + 4.A.1.1.1
pfam k141_15048 k141_15048_10 6600 7157 + DUF1440
CAZyme k141_15048 k141_15048_11 7105 8274 - GT87
TC k141_15048 k141_15048_12 8271 10076 - 3.A.1.120.6
pfam k141_15048 k141_15048_13 10084 10854 - DUF4191
CAZyme k141_15048 k141_15048_14 11056 12747 - GH33
CAZyme k141_15048 k141_15048_15 12822 15137 - GH33
TC k141_15048 k141_15048_16 15210 16742 - 2.A.1.12.1
Gene ID: k141_15048_3
Type: CAZyme
Location: 1413 - 2525 (+)
Gene ID: k141_15048_4
Type: pfam
Location: 2549 - 3157 (+)
Gene ID: k141_15048_5
Type: TC
Location: 3234 - 4622 (-)
Gene ID: k141_15048_6
Type: TF
Location: 4798 - 5523 (+)
Gene ID: k141_15048_7
Type: TC
Location: 5520 - 5768 (+)
Gene ID: k141_15048_8
Type: TC
Location: 5898 - 6128 (+)
Gene ID: k141_15048_9
Type: TC
Location: 6128 - 6622 (+)
Gene ID: k141_15048_10
Type: pfam
Location: 6600 - 7157 (+)
Gene ID: k141_15048_11
Type: CAZyme
Location: 7105 - 8274 (-)
Gene ID: k141_15048_12
Type: TC
Location: 8271 - 10076 (-)
Gene ID: k141_15048_13
Type: pfam
Location: 10084 - 10854 (-)
Gene ID: k141_15048_14
Type: CAZyme
Location: 11056 - 12747 (-)
Gene ID: k141_15048_15
Type: CAZyme
Location: 12822 - 15137 (-)
Gene ID: k141_15048_16
Type: TC
Location: 15210 - 16742 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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