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Cluster: CGMR031366_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_10193 k141_10193_2 488 2854 + GT35
NULL(UNKNOWN) k141_10193 k141_10193_3 3171 3311 - NULL(UNKNOWN)
[View Structural Homologs]
STP k141_10193 k141_10193_4 3296 3931 - Sigma70_r4_2
CAZyme k141_10193 k141_10193_5 4119 6335 - GH112
pfam k141_10193 k141_10193_6 6465 7676 - ROK | MarR_2
STP k141_10193 k141_10193_7 8041 9384 + SBP_bac_1
TC k141_10193 k141_10193_8 9485 10363 + 3.A.1.1.18
TC k141_10193 k141_10193_9 10363 11244 + 3.A.1.1.18
pfam k141_10193 k141_10193_10 11261 11437 + DUF6903
TF k141_10193 k141_10193_11 11439 12503 + LacI
CAZyme k141_10193 k141_10193_12 12493 14682 + GH95
Gene ID: k141_10193_2
Type: CAZyme
Location: 488 - 2854 (+)
Gene ID: k141_10193_3
Type:
Location: 3171 - 3311 (-)
Gene ID: k141_10193_4
Type: STP
Location: 3296 - 3931 (-)
Gene ID: k141_10193_5
Type: CAZyme
Location: 4119 - 6335 (-)
Gene ID: k141_10193_6
Type: pfam
Location: 6465 - 7676 (-)
Gene ID: k141_10193_7
Type: STP
Location: 8041 - 9384 (+)
Gene ID: k141_10193_8
Type: TC
Location: 9485 - 10363 (+)
Gene ID: k141_10193_9
Type: TC
Location: 10363 - 11244 (+)
Gene ID: k141_10193_10
Type: pfam
Location: 11261 - 11437 (+)
Gene ID: k141_10193_11
Type: TF
Location: 11439 - 12503 (+)
Gene ID: k141_10193_12
Type: CAZyme
Location: 12493 - 14682 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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