Cluster: CGMR031043_CGC20
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR031043
- CGC Family ID: CGCFAM_05458
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_203742 | k141_203742_29 | 30596 | 32161 | + | 3.A.1.120.6 |
| NULL(UNKNOWN) | k141_203742 | k141_203742_30 | 32361 | 32588 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_203742 | k141_203742_31 | 32724 | 34235 | + | DUF5776 |
| TC | k141_203742 | k141_203742_32 | 34328 | 35713 | - | 2.A.2.3.3 |
| CAZyme | k141_203742 | k141_203742_33 | 35738 | 37216 | - | GH13_18 |
| CAZyme | k141_203742 | k141_203742_34 | 37224 | 38873 | - | GH13_31 |
Gene ID: k141_203742_29
Type: TC
Location: 30596 - 32161 (+)
Type: TC
Location: 30596 - 32161 (+)
Gene ID: k141_203742_30
Type:
Location: 32361 - 32588 (+)
Type:
Location: 32361 - 32588 (+)
Gene ID: k141_203742_31
Type: pfam
Location: 32724 - 34235 (+)
Type: pfam
Location: 32724 - 34235 (+)
Gene ID: k141_203742_32
Type: TC
Location: 34328 - 35713 (-)
Type: TC
Location: 34328 - 35713 (-)
Gene ID: k141_203742_33
Type: CAZyme
Location: 35738 - 37216 (-)
Type: CAZyme
Location: 35738 - 37216 (-)
Gene ID: k141_203742_34
Type: CAZyme
Location: 37224 - 38873 (-)
Type: CAZyme
Location: 37224 - 38873 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Lentilactobacillus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.