Cluster: CGMR031043_CGC14
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 4
- Substrate:
- Genome ID: CGMR031043
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_101805 | k141_101805_1 | 145 | 711 | - | 2.A.1.68.1 |
| NULL(UNKNOWN) | k141_101805 | k141_101805_2 | 944 | 1186 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_101805 | k141_101805_3 | 1807 | 4044 | - | CBM35 |
| CAZyme | k141_101805 | k141_101805_4 | 4217 | 6187 | - | GH127 |
| TC | k141_101805 | k141_101805_5 | 6257 | 7681 | - | 2.A.2.3.3 |
| TF | k141_101805 | k141_101805_6 | 8042 | 8992 | + | HTH_AraC | HTH_AraC |
| NULL(UNKNOWN) | k141_101805 | k141_101805_7 | 9060 | 9257 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_101805 | k141_101805_8 | 9354 | 10502 | + | GH25 |
| NULL(UNKNOWN) | k141_101805 | k141_101805_9 | 10456 | 10557 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_101805 | k141_101805_10 | 10774 | 11490 | + | GH25 |
| pfam | k141_101805 | k141_101805_11 | 11582 | 12496 | - | ZnuA |
| TC | k141_101805 | k141_101805_12 | 12609 | 13238 | - | 1.C.105.2.6 |
| pfam | k141_101805 | k141_101805_13 | 13489 | 14106 | + | Isochorismatase |
| TC | k141_101805 | k141_101805_14 | 14314 | 15720 | - | 2.A.26.1.9 |
Gene ID: k141_101805_1
Type: TC
Location: 145 - 711 (-)
Type: TC
Location: 145 - 711 (-)
Gene ID: k141_101805_2
Type:
Location: 944 - 1186 (-)
Type:
Location: 944 - 1186 (-)
Gene ID: k141_101805_3
Type: CAZyme
Location: 1807 - 4044 (-)
Type: CAZyme
Location: 1807 - 4044 (-)
Gene ID: k141_101805_4
Type: CAZyme
Location: 4217 - 6187 (-)
Type: CAZyme
Location: 4217 - 6187 (-)
Gene ID: k141_101805_5
Type: TC
Location: 6257 - 7681 (-)
Type: TC
Location: 6257 - 7681 (-)
Gene ID: k141_101805_6
Type: TF
Location: 8042 - 8992 (+)
Type: TF
Location: 8042 - 8992 (+)
Gene ID: k141_101805_7
Type:
Location: 9060 - 9257 (+)
Type:
Location: 9060 - 9257 (+)
Gene ID: k141_101805_8
Type: CAZyme
Location: 9354 - 10502 (+)
Type: CAZyme
Location: 9354 - 10502 (+)
Gene ID: k141_101805_9
Type:
Location: 10456 - 10557 (+)
Type:
Location: 10456 - 10557 (+)
Gene ID: k141_101805_10
Type: CAZyme
Location: 10774 - 11490 (+)
Type: CAZyme
Location: 10774 - 11490 (+)
Gene ID: k141_101805_11
Type: pfam
Location: 11582 - 12496 (-)
Type: pfam
Location: 11582 - 12496 (-)
Gene ID: k141_101805_12
Type: TC
Location: 12609 - 13238 (-)
Type: TC
Location: 12609 - 13238 (-)
Gene ID: k141_101805_13
Type: pfam
Location: 13489 - 14106 (+)
Type: pfam
Location: 13489 - 14106 (+)
Gene ID: k141_101805_14
Type: TC
Location: 14314 - 15720 (-)
Type: TC
Location: 14314 - 15720 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Lentilactobacillus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.