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Cluster: CGMR030909_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_179207 k141_179207_17 16948 17391 + 4.A.6.1.16
pfam k141_179207 k141_179207_18 17391 17672 + YajC
TC k141_179207 k141_179207_19 17709 18191 + 4.A.6.1.4
TC k141_179207 k141_179207_20 18282 19082 + 4.A.6.1.4
TC k141_179207 k141_179207_21 19072 20154 + 4.A.6.1.4
TF k141_179207 k141_179207_22 20340 21071 + GntR
STP k141_179207 k141_179207_23 21186 22352 + SIS | SIS
CAZyme k141_179207 k141_179207_24 22472 23641 + CE9
Gene ID: k141_179207_17
Type: TC
Location: 16948 - 17391 (+)
Gene ID: k141_179207_18
Type: pfam
Location: 17391 - 17672 (+)
Gene ID: k141_179207_19
Type: TC
Location: 17709 - 18191 (+)
Gene ID: k141_179207_20
Type: TC
Location: 18282 - 19082 (+)
Gene ID: k141_179207_21
Type: TC
Location: 19072 - 20154 (+)
Gene ID: k141_179207_22
Type: TF
Location: 20340 - 21071 (+)
Gene ID: k141_179207_23
Type: STP
Location: 21186 - 22352 (+)
Gene ID: k141_179207_24
Type: CAZyme
Location: 22472 - 23641 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_179207_18 vegan > omnivore 1.00400 0.00863

🧭 Explore Read Mapping of CGC

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