Cluster: CGMR030909_CGC18
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR030909
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_145600 | k141_145600_24 | 22782 | 23318 | - | 4.A.1.2.6 |
| CAZyme | k141_145600 | k141_145600_25 | 23459 | 24907 | - | GH1 |
| TF | k141_145600 | k141_145600_26 | 25075 | 26067 | - | 0035607 |
| CAZyme | k141_145600 | k141_145600_27 | 26182 | 28773 | + | GH106 |
Gene ID: k141_145600_24
Type: TC
Location: 22782 - 23318 (-)
Type: TC
Location: 22782 - 23318 (-)
Gene ID: k141_145600_25
Type: CAZyme
Location: 23459 - 24907 (-)
Type: CAZyme
Location: 23459 - 24907 (-)
Gene ID: k141_145600_26
Type: TF
Location: 25075 - 26067 (-)
Type: TF
Location: 25075 - 26067 (-)
Gene ID: k141_145600_27
Type: CAZyme
Location: 26182 - 28773 (+)
Type: CAZyme
Location: 26182 - 28773 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp958439425
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.