Cluster: CGMR030909_CGC17
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR030909
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_37220 | k141_37220_23 | 31474 | 33801 | - | 9.A.8.1.6 |
| TC | k141_37220 | k141_37220_24 | 33925 | 34146 | - | 9.A.8.1.6 |
| STP | k141_37220 | k141_37220_25 | 34186 | 34428 | - | FeoA |
| STP | k141_37220 | k141_37220_26 | 34617 | 34865 | - | PTS-HPr |
| TC | k141_37220 | k141_37220_27 | 35287 | 36750 | - | 2.A.3.7.4 |
| NULL(UNKNOWN) | k141_37220 | k141_37220_28 | 36904 | 37359 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_37220 | k141_37220_29 | 37363 | 40371 | - | GH2 |
Gene ID: k141_37220_23
Type: TC
Location: 31474 - 33801 (-)
Type: TC
Location: 31474 - 33801 (-)
Gene ID: k141_37220_24
Type: TC
Location: 33925 - 34146 (-)
Type: TC
Location: 33925 - 34146 (-)
Gene ID: k141_37220_25
Type: STP
Location: 34186 - 34428 (-)
Type: STP
Location: 34186 - 34428 (-)
Gene ID: k141_37220_26
Type: STP
Location: 34617 - 34865 (-)
Type: STP
Location: 34617 - 34865 (-)
Gene ID: k141_37220_27
Type: TC
Location: 35287 - 36750 (-)
Type: TC
Location: 35287 - 36750 (-)
Gene ID: k141_37220_28
Type:
Location: 36904 - 37359 (-)
Type:
Location: 36904 - 37359 (-)
Gene ID: k141_37220_29
Type: CAZyme
Location: 37363 - 40371 (-)
Type: CAZyme
Location: 37363 - 40371 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp958439425
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.