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Cluster: CGMR030890_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_192499 k141_192499_13 12056 13753 - GT83
TC k141_192499 k141_192499_14 13949 14341 - 2.A.7.22.2
TC k141_192499 k141_192499_15 14341 14691 - 2.A.7.22.2
CAZyme k141_192499 k141_192499_16 14698 16359 - GT83
pfam k141_192499 k141_192499_17 16366 17259 - Polysacc_deac_1
pfam k141_192499 k141_192499_18 17259 19244 - Formyl_trans_N | Epimerase | Formyl_trans_C | GDP_Man_Dehyd
CAZyme k141_192499 k141_192499_19 19244 20233 - GT2
STP k141_192499 k141_192499_20 20234 21379 - Aminotran_1_2
TC k141_192499 k141_192499_21 21523 22296 - 3.A.1.13.1
TC k141_192499 k141_192499_22 22296 23306 - 3.A.1.13.1
Gene ID: k141_192499_13
Type: CAZyme
Location: 12056 - 13753 (-)
Gene ID: k141_192499_14
Type: TC
Location: 13949 - 14341 (-)
Gene ID: k141_192499_15
Type: TC
Location: 14341 - 14691 (-)
Gene ID: k141_192499_16
Type: CAZyme
Location: 14698 - 16359 (-)
Gene ID: k141_192499_17
Type: pfam
Location: 16366 - 17259 (-)
Gene ID: k141_192499_18
Type: pfam
Location: 17259 - 19244 (-)
Gene ID: k141_192499_19
Type: CAZyme
Location: 19244 - 20233 (-)
Gene ID: k141_192499_20
Type: STP
Location: 20234 - 21379 (-)
Gene ID: k141_192499_21
Type: TC
Location: 21523 - 22296 (-)
Gene ID: k141_192499_22
Type: TC
Location: 22296 - 23306 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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