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Cluster: CGMR030890_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_20908 k141_20908_7 4385 5026 - 5.A.3.3.2
TC k141_20908 k141_20908_8 5023 7461 - 5.A.3.3.2
TF k141_20908 k141_20908_9 7850 8635 + HTH_AraC | HTH_AraC
TC k141_20908 k141_20908_10 8909 9496 + 5.A.3.2.1
TC k141_20908 k141_20908_11 9545 11956 + 5.A.3.2.1
TC k141_20908 k141_20908_12 11966 12856 + 5.A.3.2.1
TC k141_20908 k141_20908_13 12849 13505 + 5.A.3.2.1
TF k141_20908 k141_20908_14 13565 13885 - HTH_3
pfam k141_20908 k141_20908_15 13885 14166 - HigB-like_toxin
CAZyme k141_20908 k141_20908_16 14294 16798 - GT51
Gene ID: k141_20908_7
Type: TC
Location: 4385 - 5026 (-)
Gene ID: k141_20908_8
Type: TC
Location: 5023 - 7461 (-)
Gene ID: k141_20908_9
Type: TF
Location: 7850 - 8635 (+)
Gene ID: k141_20908_10
Type: TC
Location: 8909 - 9496 (+)
Gene ID: k141_20908_11
Type: TC
Location: 9545 - 11956 (+)
Gene ID: k141_20908_12
Type: TC
Location: 11966 - 12856 (+)
Gene ID: k141_20908_13
Type: TC
Location: 12849 - 13505 (+)
Gene ID: k141_20908_14
Type: TF
Location: 13565 - 13885 (-)
Gene ID: k141_20908_15
Type: pfam
Location: 13885 - 14166 (-)
Gene ID: k141_20908_16
Type: CAZyme
Location: 14294 - 16798 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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