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Cluster: CGMR030890_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_181094 k141_181094_2 2103 2651 + 3.D.1.9.2
pfam k141_181094 k141_181094_3 2662 3003 + HypA
pfam k141_181094 k141_181094_4 3040 3312 + HupF_HypC
CAZyme k141_181094 k141_181094_5 3608 5020 + GH32
pfam k141_181094 k141_181094_6 5080 5436 - Fumarate_red_D
pfam k141_181094 k141_181094_7 5451 5846 - Fumarate_red_C
TC k141_181094 k141_181094_8 5858 6592 - 3.D.10.1.3
TC k141_181094 k141_181094_9 6585 8387 - 3.D.10.1.4
Gene ID: k141_181094_2
Type: TC
Location: 2103 - 2651 (+)
Gene ID: k141_181094_3
Type: pfam
Location: 2662 - 3003 (+)
Gene ID: k141_181094_4
Type: pfam
Location: 3040 - 3312 (+)
Gene ID: k141_181094_5
Type: CAZyme
Location: 3608 - 5020 (+)
Gene ID: k141_181094_6
Type: pfam
Location: 5080 - 5436 (-)
Gene ID: k141_181094_7
Type: pfam
Location: 5451 - 5846 (-)
Gene ID: k141_181094_8
Type: TC
Location: 5858 - 6592 (-)
Gene ID: k141_181094_9
Type: TC
Location: 6585 - 8387 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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