Cluster: CGMR030773_CGC29
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR030773
- CGC Family ID: CGCFAM_07942
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_415412 | k141_415412_66 | 65483 | 67372 | - | 3.D.1.5.1 |
| TC | k141_415412 | k141_415412_67 | 67362 | 67865 | - | 3.D.1.5.1 |
| pfam | k141_415412 | k141_415412_68 | 68024 | 69295 | - | Fe_hyd_lg_C |
| TC | k141_415412 | k141_415412_69 | 69295 | 71028 | - | 3.A.1.135.5 |
| TC | k141_415412 | k141_415412_70 | 71030 | 72757 | - | 3.A.1.135.5 |
| TC | k141_415412 | k141_415412_71 | 72754 | 74223 | - | 2.A.66.2.23 |
| pfam | k141_415412 | k141_415412_72 | 74272 | 75429 | - | Glyphos_transf |
| TC | k141_415412 | k141_415412_73 | 75483 | 77672 | - | 3.A.1.135.5 |
| pfam | k141_415412 | k141_415412_74 | 77689 | 78231 | - | DUF1854 |
| TC | k141_415412 | k141_415412_75 | 78297 | 80633 | - | 3.A.1.135.5 |
| STP | k141_415412 | k141_415412_76 | 80927 | 81562 | - | TetR_N |
| TC | k141_415412 | k141_415412_77 | 81562 | 83556 | - | 9.B.74.1.4 |
| pfam | k141_415412 | k141_415412_78 | 83571 | 85649 | - | MMPL | MMPL |
| peptidase | k141_415412 | k141_415412_79 | 85821 | 86708 | + | S08.UPA |
| CAZyme | k141_415412 | k141_415412_80 | 86719 | 88971 | - | GT35 |
Gene ID: k141_415412_66
Type: TC
Location: 65483 - 67372 (-)
Type: TC
Location: 65483 - 67372 (-)
Gene ID: k141_415412_67
Type: TC
Location: 67362 - 67865 (-)
Type: TC
Location: 67362 - 67865 (-)
Gene ID: k141_415412_68
Type: pfam
Location: 68024 - 69295 (-)
Type: pfam
Location: 68024 - 69295 (-)
Gene ID: k141_415412_69
Type: TC
Location: 69295 - 71028 (-)
Type: TC
Location: 69295 - 71028 (-)
Gene ID: k141_415412_70
Type: TC
Location: 71030 - 72757 (-)
Type: TC
Location: 71030 - 72757 (-)
Gene ID: k141_415412_71
Type: TC
Location: 72754 - 74223 (-)
Type: TC
Location: 72754 - 74223 (-)
Gene ID: k141_415412_72
Type: pfam
Location: 74272 - 75429 (-)
Type: pfam
Location: 74272 - 75429 (-)
Gene ID: k141_415412_73
Type: TC
Location: 75483 - 77672 (-)
Type: TC
Location: 75483 - 77672 (-)
Gene ID: k141_415412_74
Type: pfam
Location: 77689 - 78231 (-)
Type: pfam
Location: 77689 - 78231 (-)
Gene ID: k141_415412_75
Type: TC
Location: 78297 - 80633 (-)
Type: TC
Location: 78297 - 80633 (-)
Gene ID: k141_415412_76
Type: STP
Location: 80927 - 81562 (-)
Type: STP
Location: 80927 - 81562 (-)
Gene ID: k141_415412_77
Type: TC
Location: 81562 - 83556 (-)
Type: TC
Location: 81562 - 83556 (-)
Gene ID: k141_415412_78
Type: pfam
Location: 83571 - 85649 (-)
Type: pfam
Location: 83571 - 85649 (-)
Gene ID: k141_415412_79
Type: peptidase
Location: 85821 - 86708 (+)
Type: peptidase
Location: 85821 - 86708 (+)
Gene ID: k141_415412_80
Type: CAZyme
Location: 86719 - 88971 (-)
Type: CAZyme
Location: 86719 - 88971 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Eubacterium_F
Species
Eubacterium_F sp947628225
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.