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Cluster: CGMR030505_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_70577 k141_70577_12 9388 10761 - 2.A.35.1.3
TC k141_70577 k141_70577_13 11121 12446 - 2.A.40.3.1
pfam k141_70577 k141_70577_14 12670 13590 - CorA
pfam k141_70577 k141_70577_15 13739 14650 + PseudoU_synth_2
TC k141_70577 k141_70577_16 14684 15439 + 2.A.109.1.3
pfam k141_70577 k141_70577_17 15445 15762 + Thioredoxin | HyaE | Thioredoxin_2 | TraF | Thioredoxin_9
TC k141_70577 k141_70577_18 15866 17191 - 2.A.66.1.32
peptidase k141_70577 k141_70577_19 17326 18723 - C69.001
TC k141_70577 k141_70577_20 18927 19691 - 3.A.1.34.1
TC k141_70577 k141_70577_21 19684 20583 - 3.A.1.34.1
pfam k141_70577 k141_70577_22 20580 21611 - ABC_sub_bind
TC k141_70577 k141_70577_23 21969 23513 + 3.A.1.121.4
pfam k141_70577 k141_70577_24 23523 24302 + ABC_trans_CmpB
CAZyme k141_70577 k141_70577_25 24411 25013 + GH73
TC k141_70577 k141_70577_26 25204 26583 - 2.A.26.1.9
Gene ID: k141_70577_12
Type: TC
Location: 9388 - 10761 (-)
Gene ID: k141_70577_13
Type: TC
Location: 11121 - 12446 (-)
Gene ID: k141_70577_14
Type: pfam
Location: 12670 - 13590 (-)
Gene ID: k141_70577_15
Type: pfam
Location: 13739 - 14650 (+)
Gene ID: k141_70577_16
Type: TC
Location: 14684 - 15439 (+)
Gene ID: k141_70577_17
Type: pfam
Location: 15445 - 15762 (+)
Gene ID: k141_70577_18
Type: TC
Location: 15866 - 17191 (-)
Gene ID: k141_70577_19
Type: peptidase
Location: 17326 - 18723 (-)
Gene ID: k141_70577_20
Type: TC
Location: 18927 - 19691 (-)
Gene ID: k141_70577_21
Type: TC
Location: 19684 - 20583 (-)
Gene ID: k141_70577_22
Type: pfam
Location: 20580 - 21611 (-)
Gene ID: k141_70577_23
Type: TC
Location: 21969 - 23513 (+)
Gene ID: k141_70577_24
Type: pfam
Location: 23523 - 24302 (+)
Gene ID: k141_70577_25
Type: CAZyme
Location: 24411 - 25013 (+)
Gene ID: k141_70577_26
Type: TC
Location: 25204 - 26583 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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