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Cluster: CGMR030505_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_55899 k141_55899_3 3158 3445 + 2.A.2.3.2
pfam k141_55899 k141_55899_4 3504 3848 + MFS_2
TC k141_55899 k141_55899_5 3852 4433 + 2.A.2.3.2
CAZyme k141_55899 k141_55899_6 4455 6752 + GH31_3
TF k141_55899 k141_55899_7 7045 7956 + HTH_AraC | HTH_AraC
TC k141_55899 k141_55899_8 8117 9610 + 2.A.2.3.2
CAZyme k141_55899 k141_55899_9 9654 11696 + GH120
STP k141_55899 k141_55899_10 11795 12964 + HTH_IclR
pfam k141_55899 k141_55899_11 13114 14004 + EamA | EamA
TC k141_55899 k141_55899_12 14073 14762 - 5.A.3.1.2
pfam k141_55899 k141_55899_13 14755 15333 - Nitrate_red_del
TC k141_55899 k141_55899_14 15326 16885 - 5.A.3.1.1
TC k141_55899 k141_55899_15 16875 20537 - 5.A.3.1.1
Gene ID: k141_55899_3
Type: TC
Location: 3158 - 3445 (+)
Gene ID: k141_55899_4
Type: pfam
Location: 3504 - 3848 (+)
Gene ID: k141_55899_5
Type: TC
Location: 3852 - 4433 (+)
Gene ID: k141_55899_6
Type: CAZyme
Location: 4455 - 6752 (+)
Gene ID: k141_55899_7
Type: TF
Location: 7045 - 7956 (+)
Gene ID: k141_55899_8
Type: TC
Location: 8117 - 9610 (+)
Gene ID: k141_55899_9
Type: CAZyme
Location: 9654 - 11696 (+)
Gene ID: k141_55899_10
Type: STP
Location: 11795 - 12964 (+)
Gene ID: k141_55899_11
Type: pfam
Location: 13114 - 14004 (+)
Gene ID: k141_55899_12
Type: TC
Location: 14073 - 14762 (-)
Gene ID: k141_55899_13
Type: pfam
Location: 14755 - 15333 (-)
Gene ID: k141_55899_14
Type: TC
Location: 15326 - 16885 (-)
Gene ID: k141_55899_15
Type: TC
Location: 16875 - 20537 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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