Cluster: CGMR030268_CGC98
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR030268
- CGC Family ID: CGCFAM_03311
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_166053 | k141_166053_9 | 6602 | 9298 | + | 1.B.14.6.12 |
| pfam | k141_166053 | k141_166053_10 | 9304 | 10350 | + | DUF4249 |
| TF | k141_166053 | k141_166053_11 | 10359 | 10802 | - | CSD |
| TC | k141_166053 | k141_166053_12 | 11001 | 13751 | + | 1.B.14.6.12 |
| pfam | k141_166053 | k141_166053_13 | 13757 | 14785 | + | DUF4249 |
| sulfatase | k141_166053 | k141_166053_14 | 14757 | 15656 | - | S1_7 |
| CAZyme | k141_166053 | k141_166053_15 | 15699 | 16877 | - | GH130_1 |
| pfam | k141_166053 | k141_166053_16 | 16939 | 18741 | - | Arylsulfotrans | Arylsulfotran_N |
| TC | k141_166053 | k141_166053_17 | 18813 | 20465 | - | 8.A.46.1.6 |
| TC | k141_166053 | k141_166053_18 | 20485 | 23535 | - | 1.B.14.6.1 |
| NULL(UNKNOWN) | k141_166053 | k141_166053_19 | 23605 | 23775 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | k141_166053 | k141_166053_20 | 24228 | 25103 | - | HTH_AraC |
| CAZyme | k141_166053 | k141_166053_21 | 25261 | 26439 | - | GH130_1 |
| pfam | k141_166053 | k141_166053_22 | 26449 | 28251 | - | Arylsulfotrans | Arylsulfotran_N |
| pfam | k141_166053 | k141_166053_23 | 28428 | 30182 | - | SusD_RagB | SusD-like_3 |
| TC | k141_166053 | k141_166053_24 | 30208 | 33222 | - | 1.B.14.6.1 |
Gene ID: k141_166053_9
Type: TC
Location: 6602 - 9298 (+)
Type: TC
Location: 6602 - 9298 (+)
Gene ID: k141_166053_10
Type: pfam
Location: 9304 - 10350 (+)
Type: pfam
Location: 9304 - 10350 (+)
Gene ID: k141_166053_11
Type: TF
Location: 10359 - 10802 (-)
Type: TF
Location: 10359 - 10802 (-)
Gene ID: k141_166053_12
Type: TC
Location: 11001 - 13751 (+)
Type: TC
Location: 11001 - 13751 (+)
Gene ID: k141_166053_13
Type: pfam
Location: 13757 - 14785 (+)
Type: pfam
Location: 13757 - 14785 (+)
Gene ID: k141_166053_14
Type: sulfatase
Location: 14757 - 15656 (-)
Type: sulfatase
Location: 14757 - 15656 (-)
Gene ID: k141_166053_15
Type: CAZyme
Location: 15699 - 16877 (-)
Type: CAZyme
Location: 15699 - 16877 (-)
Gene ID: k141_166053_16
Type: pfam
Location: 16939 - 18741 (-)
Type: pfam
Location: 16939 - 18741 (-)
Gene ID: k141_166053_17
Type: TC
Location: 18813 - 20465 (-)
Type: TC
Location: 18813 - 20465 (-)
Gene ID: k141_166053_18
Type: TC
Location: 20485 - 23535 (-)
Type: TC
Location: 20485 - 23535 (-)
Gene ID: k141_166053_19
Type:
Location: 23605 - 23775 (-)
Type:
Location: 23605 - 23775 (-)
Gene ID: k141_166053_20
Type: TF
Location: 24228 - 25103 (-)
Type: TF
Location: 24228 - 25103 (-)
Gene ID: k141_166053_21
Type: CAZyme
Location: 25261 - 26439 (-)
Type: CAZyme
Location: 25261 - 26439 (-)
Gene ID: k141_166053_22
Type: pfam
Location: 26449 - 28251 (-)
Type: pfam
Location: 26449 - 28251 (-)
Gene ID: k141_166053_23
Type: pfam
Location: 28428 - 30182 (-)
Type: pfam
Location: 28428 - 30182 (-)
Gene ID: k141_166053_24
Type: TC
Location: 30208 - 33222 (-)
Type: TC
Location: 30208 - 33222 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides chongii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.