Cluster: CGMR030268_CGC95
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR030268
- CGC Family ID: CGCFAM_03773
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_58352 | k141_58352_2 | 3697 | 5598 | + | 4.C.1.1.14 |
| CAZyme | k141_58352 | k141_58352_3 | 5641 | 8244 | + | GH2 |
| TF | k141_58352 | k141_58352_4 | 8292 | 8618 | - | HTH_3 |
| pfam | k141_58352 | k141_58352_5 | 8664 | 8969 | - | Gp49 |
| TC | k141_58352 | k141_58352_6 | 9149 | 11740 | + | 1.B.14.6.14 |
| TC | k141_58352 | k141_58352_7 | 11748 | 13040 | + | 2.A.35.1.5 |
| TC | k141_58352 | k141_58352_8 | 13392 | 15707 | + | 1.B.14.1.10 |
Gene ID: k141_58352_2
Type: TC
Location: 3697 - 5598 (+)
Type: TC
Location: 3697 - 5598 (+)
Gene ID: k141_58352_3
Type: CAZyme
Location: 5641 - 8244 (+)
Type: CAZyme
Location: 5641 - 8244 (+)
Gene ID: k141_58352_4
Type: TF
Location: 8292 - 8618 (-)
Type: TF
Location: 8292 - 8618 (-)
Gene ID: k141_58352_5
Type: pfam
Location: 8664 - 8969 (-)
Type: pfam
Location: 8664 - 8969 (-)
Gene ID: k141_58352_6
Type: TC
Location: 9149 - 11740 (+)
Type: TC
Location: 9149 - 11740 (+)
Gene ID: k141_58352_7
Type: TC
Location: 11748 - 13040 (+)
Type: TC
Location: 11748 - 13040 (+)
Gene ID: k141_58352_8
Type: TC
Location: 13392 - 15707 (+)
Type: TC
Location: 13392 - 15707 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides chongii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_58352_6 | vegan > omnivore | 1.49443 | 0.04957 |
| k141_58352_6 | vegetarian > omnivore | 1.28241 | 0.01030 |