Cluster: CGMR030268_CGC9
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR030268
- CGC Family ID: CGCFAM_08456
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_89265 | k141_89265_26 | 42689 | 45994 | + | 1.B.14.6.1 |
| sulfatase | k141_89265 | k141_89265_27 | 46013 | 47614 | + | S1_27 |
| CAZyme | k141_89265 | k141_89265_28 | 47690 | 49126 | + | GH109 |
| CAZyme | k141_89265 | k141_89265_29 | 49134 | 50273 | + | GH20 |
| TF | k141_89265 | k141_89265_30 | 50451 | 51044 | + | GerE |
| STP | k141_89265 | k141_89265_31 | 51114 | 52133 | + | FecR |
| TC | k141_89265 | k141_89265_32 | 52372 | 55755 | + | 1.B.14.6.1 |
| pfam | k141_89265 | k141_89265_33 | 55780 | 57531 | + | SusD_RagB | SusD-like_3 |
| pfam | k141_89265 | k141_89265_34 | 57644 | 58597 | + | DUF4838 |
| CAZyme | k141_89265 | k141_89265_35 | 58761 | 63032 | - | CBM4 | GH5_25 |
| pfam | k141_89265 | k141_89265_36 | 63483 | 64244 | - | Fic |
| pfam | k141_89265 | k141_89265_37 | 64486 | 65508 | - | RF-1 | PCRF |
| TC | k141_89265 | k141_89265_38 | 65664 | 67472 | - | 4.C.1.1.14 |
Gene ID: k141_89265_26
Type: TC
Location: 42689 - 45994 (+)
Type: TC
Location: 42689 - 45994 (+)
Gene ID: k141_89265_27
Type: sulfatase
Location: 46013 - 47614 (+)
Type: sulfatase
Location: 46013 - 47614 (+)
Gene ID: k141_89265_28
Type: CAZyme
Location: 47690 - 49126 (+)
Type: CAZyme
Location: 47690 - 49126 (+)
Gene ID: k141_89265_29
Type: CAZyme
Location: 49134 - 50273 (+)
Type: CAZyme
Location: 49134 - 50273 (+)
Gene ID: k141_89265_30
Type: TF
Location: 50451 - 51044 (+)
Type: TF
Location: 50451 - 51044 (+)
Gene ID: k141_89265_31
Type: STP
Location: 51114 - 52133 (+)
Type: STP
Location: 51114 - 52133 (+)
Gene ID: k141_89265_32
Type: TC
Location: 52372 - 55755 (+)
Type: TC
Location: 52372 - 55755 (+)
Gene ID: k141_89265_33
Type: pfam
Location: 55780 - 57531 (+)
Type: pfam
Location: 55780 - 57531 (+)
Gene ID: k141_89265_34
Type: pfam
Location: 57644 - 58597 (+)
Type: pfam
Location: 57644 - 58597 (+)
Gene ID: k141_89265_35
Type: CAZyme
Location: 58761 - 63032 (-)
Type: CAZyme
Location: 58761 - 63032 (-)
Gene ID: k141_89265_36
Type: pfam
Location: 63483 - 64244 (-)
Type: pfam
Location: 63483 - 64244 (-)
Gene ID: k141_89265_37
Type: pfam
Location: 64486 - 65508 (-)
Type: pfam
Location: 64486 - 65508 (-)
Gene ID: k141_89265_38
Type: TC
Location: 65664 - 67472 (-)
Type: TC
Location: 65664 - 67472 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides chongii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_89265_37 | vegetarian > omnivore | 1.24620 | 0.01030 |