Cluster: CGMR030268_CGC89
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR030268
- CGC Family ID: CGCFAM_00823
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_1216 | k141_1216_57 | 61202 | 64654 | + | 1.B.14.6.1 |
| pfam | k141_1216 | k141_1216_58 | 64667 | 66697 | + | SusD_RagB | SusD-like_3 |
| CAZyme | k141_1216 | k141_1216_59 | 66958 | 69762 | + | GH2 |
| CAZyme | k141_1216 | k141_1216_60 | 69832 | 73962 | + | CBM67 | GH29 | GH78 |
| NULL(UNKNOWN) | k141_1216 | k141_1216_61 | 73973 | 76393 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | k141_1216 | k141_1216_62 | 76536 | 77441 | - | HTH_AraC | HTH_AraC |
| TC | k141_1216 | k141_1216_63 | 77604 | 80933 | + | 9.A.25.1.1 |
Gene ID: k141_1216_57
Type: TC
Location: 61202 - 64654 (+)
Type: TC
Location: 61202 - 64654 (+)
Gene ID: k141_1216_58
Type: pfam
Location: 64667 - 66697 (+)
Type: pfam
Location: 64667 - 66697 (+)
Gene ID: k141_1216_59
Type: CAZyme
Location: 66958 - 69762 (+)
Type: CAZyme
Location: 66958 - 69762 (+)
Gene ID: k141_1216_60
Type: CAZyme
Location: 69832 - 73962 (+)
Type: CAZyme
Location: 69832 - 73962 (+)
Gene ID: k141_1216_61
Type:
Location: 73973 - 76393 (+)
Type:
Location: 73973 - 76393 (+)
Gene ID: k141_1216_62
Type: TF
Location: 76536 - 77441 (-)
Type: TF
Location: 76536 - 77441 (-)
Gene ID: k141_1216_63
Type: TC
Location: 77604 - 80933 (+)
Type: TC
Location: 77604 - 80933 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides chongii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.