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Cluster: CGMR030268_CGC85

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_50287 k141_50287_9 8324 11755 + 1.B.14.6.1
pfam k141_50287 k141_50287_10 11768 13552 + SusD_RagB | SusD-like_3
CAZyme k141_50287 k141_50287_11 13650 15935 + CBM6 | GH120
CAZyme k141_50287 k141_50287_12 15950 18208 + GH182
pfam k141_50287 k141_50287_13 18660 21626 + Laminin_G_3
CAZyme k141_50287 k141_50287_14 21662 23908 + GH92
CAZyme k141_50287 k141_50287_15 23926 26661 + GH38
CAZyme k141_50287 k141_50287_16 26770 28665 + GH120
CAZyme k141_50287 k141_50287_17 28672 30093 + GH43_2
CAZyme k141_50287 k141_50287_18 30131 32659 + GH2
pfam k141_50287 k141_50287_19 32895 35453 + Glyco_hydro_38N
CAZyme k141_50287 k141_50287_20 35458 37761 + GH182
NULL(UNKNOWN) k141_50287 k141_50287_21 37773 40052 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_50287 k141_50287_22 40282 42105 + CBM32 | GH43_28
CAZyme k141_50287 k141_50287_23 42135 44579 + GH2
CAZyme k141_50287 k141_50287_24 44593 46809 + GH3
CAZyme k141_50287 k141_50287_25 46823 48631 + GH110
CAZyme k141_50287 k141_50287_26 48652 50910 + GH95
STP k141_50287 k141_50287_27 51094 51642 + Sigma70_r2 | Sigma70_r4_2
STP k141_50287 k141_50287_28 51887 52897 + FecR
TC k141_50287 k141_50287_29 53074 56346 + 1.B.14.6.1
TC k141_50287 k141_50287_30 56358 58070 + 8.A.46.1.6
CAZyme k141_50287 k141_50287_31 58134 60011 + GH97
CAZyme k141_50287 k141_50287_32 60132 62495 + GH92
Gene ID: k141_50287_9
Type: TC
Location: 8324 - 11755 (+)
Gene ID: k141_50287_10
Type: pfam
Location: 11768 - 13552 (+)
Gene ID: k141_50287_11
Type: CAZyme
Location: 13650 - 15935 (+)
Gene ID: k141_50287_12
Type: CAZyme
Location: 15950 - 18208 (+)
Gene ID: k141_50287_13
Type: pfam
Location: 18660 - 21626 (+)
Gene ID: k141_50287_14
Type: CAZyme
Location: 21662 - 23908 (+)
Gene ID: k141_50287_15
Type: CAZyme
Location: 23926 - 26661 (+)
Gene ID: k141_50287_16
Type: CAZyme
Location: 26770 - 28665 (+)
Gene ID: k141_50287_17
Type: CAZyme
Location: 28672 - 30093 (+)
Gene ID: k141_50287_18
Type: CAZyme
Location: 30131 - 32659 (+)
Gene ID: k141_50287_19
Type: pfam
Location: 32895 - 35453 (+)
Gene ID: k141_50287_20
Type: CAZyme
Location: 35458 - 37761 (+)
Gene ID: k141_50287_21
Type:
Location: 37773 - 40052 (+)
Gene ID: k141_50287_22
Type: CAZyme
Location: 40282 - 42105 (+)
Gene ID: k141_50287_23
Type: CAZyme
Location: 42135 - 44579 (+)
Gene ID: k141_50287_24
Type: CAZyme
Location: 44593 - 46809 (+)
Gene ID: k141_50287_25
Type: CAZyme
Location: 46823 - 48631 (+)
Gene ID: k141_50287_26
Type: CAZyme
Location: 48652 - 50910 (+)
Gene ID: k141_50287_27
Type: STP
Location: 51094 - 51642 (+)
Gene ID: k141_50287_28
Type: STP
Location: 51887 - 52897 (+)
Gene ID: k141_50287_29
Type: TC
Location: 53074 - 56346 (+)
Gene ID: k141_50287_30
Type: TC
Location: 56358 - 58070 (+)
Gene ID: k141_50287_31
Type: CAZyme
Location: 58134 - 60011 (+)
Gene ID: k141_50287_32
Type: CAZyme
Location: 60132 - 62495 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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