Cluster: CGMR030268_CGC81
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR030268
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_58442 | k141_58442_17 | 13939 | 14886 | + | 2.A.19.5.2 |
| pfam | k141_58442 | k141_58442_18 | 14970 | 15671 | + | DUF5020 |
| TC | k141_58442 | k141_58442_19 | 15682 | 16977 | + | 2.A.40.7.6 |
| peptidase | k141_58442 | k141_58442_20 | 17064 | 19109 | - | M13.017 |
| CAZyme | k141_58442 | k141_58442_21 | 19277 | 21604 | + | GH35 |
| pfam | k141_58442 | k141_58442_22 | 21802 | 22812 | - | AI-2E_transport |
| CAZyme | k141_58442 | k141_58442_23 | 22931 | 24565 | - | GH33 |
| sulfatase | k141_58442 | k141_58442_24 | 24555 | 25640 | - | S1_15 |
| pfam | k141_58442 | k141_58442_25 | 25680 | 27095 | - | FAD_binding_2 | GIDA | Pyr_redox_2 | FAD_oxidored | NAD_binding_8 |
| CAZyme | k141_58442 | k141_58442_26 | 27109 | 30873 | - | GH33 |
| TC | k141_58442 | k141_58442_27 | 30946 | 32400 | - | 8.A.46.1.4 |
| TC | k141_58442 | k141_58442_28 | 32419 | 35553 | - | 1.B.14.6.1 |
Gene ID: k141_58442_17
Type: TC
Location: 13939 - 14886 (+)
Type: TC
Location: 13939 - 14886 (+)
Gene ID: k141_58442_18
Type: pfam
Location: 14970 - 15671 (+)
Type: pfam
Location: 14970 - 15671 (+)
Gene ID: k141_58442_19
Type: TC
Location: 15682 - 16977 (+)
Type: TC
Location: 15682 - 16977 (+)
Gene ID: k141_58442_20
Type: peptidase
Location: 17064 - 19109 (-)
Type: peptidase
Location: 17064 - 19109 (-)
Gene ID: k141_58442_21
Type: CAZyme
Location: 19277 - 21604 (+)
Type: CAZyme
Location: 19277 - 21604 (+)
Gene ID: k141_58442_22
Type: pfam
Location: 21802 - 22812 (-)
Type: pfam
Location: 21802 - 22812 (-)
Gene ID: k141_58442_23
Type: CAZyme
Location: 22931 - 24565 (-)
Type: CAZyme
Location: 22931 - 24565 (-)
Gene ID: k141_58442_24
Type: sulfatase
Location: 24555 - 25640 (-)
Type: sulfatase
Location: 24555 - 25640 (-)
Gene ID: k141_58442_25
Type: pfam
Location: 25680 - 27095 (-)
Type: pfam
Location: 25680 - 27095 (-)
Gene ID: k141_58442_26
Type: CAZyme
Location: 27109 - 30873 (-)
Type: CAZyme
Location: 27109 - 30873 (-)
Gene ID: k141_58442_27
Type: TC
Location: 30946 - 32400 (-)
Type: TC
Location: 30946 - 32400 (-)
Gene ID: k141_58442_28
Type: TC
Location: 32419 - 35553 (-)
Type: TC
Location: 32419 - 35553 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides chongii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_58442_18 | vegetarian > vegan | 1.05738 | 0.03644 |