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Cluster: CGMR030268_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_89265 k141_89265_10 15402 16847 - 2.A.1.14.25
TF k141_89265 k141_89265_11 17064 21074 + HTH_AraC
TF k141_89265 k141_89265_12 21084 22100 - LacI
TC k141_89265 k141_89265_13 22429 23331 + 8.A.5.1.6
pfam k141_89265 k141_89265_14 23364 24287 + Amidohydro_2
TC k141_89265 k141_89265_15 24311 25561 + 2.A.1.7.1
sulfatase k141_89265 k141_89265_16 25583 26599 + S1_16
CAZyme k141_89265 k141_89265_17 26785 29304 + CE17
Gene ID: k141_89265_10
Type: TC
Location: 15402 - 16847 (-)
Gene ID: k141_89265_11
Type: TF
Location: 17064 - 21074 (+)
Gene ID: k141_89265_12
Type: TF
Location: 21084 - 22100 (-)
Gene ID: k141_89265_13
Type: TC
Location: 22429 - 23331 (+)
Gene ID: k141_89265_14
Type: pfam
Location: 23364 - 24287 (+)
Gene ID: k141_89265_15
Type: TC
Location: 24311 - 25561 (+)
Gene ID: k141_89265_16
Type: sulfatase
Location: 25583 - 26599 (+)
Gene ID: k141_89265_17
Type: CAZyme
Location: 26785 - 29304 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_89265_17 vegetarian > omnivore 1.34850 0.01030

🧭 Explore Read Mapping of CGC

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