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Cluster: CGMR030268_CGC78

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_165182 k141_165182_21 27029 27889 + 2.A.64.1.3
CAZyme k141_165182 k141_165182_22 27993 30209 + GH92
peptidase k141_165182 k141_165182_23 30348 31346 + T02.UPW
CAZyme k141_165182 k141_165182_24 31426 32289 - CE1
TC k141_165182 k141_165182_25 32426 34684 + 2.A.37.1.5
TC k141_165182 k141_165182_26 34757 36355 - 8.A.46.2.2
TC k141_165182 k141_165182_27 36373 39813 - 1.B.14.6.2
STP k141_165182 k141_165182_28 40109 41077 - FecR
TF k141_165182 k141_165182_29 41124 41741 - GerE
CAZyme k141_165182 k141_165182_30 41927 44629 + GH3
CAZyme k141_165182 k141_165182_31 44635 46947 + GH20
pfam k141_165182 k141_165182_32 47052 47888 + DUF5032
CAZyme k141_165182 k141_165182_33 48151 49317 + PL38
CAZyme k141_165182 k141_165182_34 49369 50613 + GH88
CAZyme k141_165182 k141_165182_35 50631 53099 + GH2
TF k141_165182 k141_165182_36 53199 57317 + HTH_AraC
TC k141_165182 k141_165182_37 57478 60615 + 1.B.14.6.1
pfam k141_165182 k141_165182_38 60640 62115 + SusD_RagB | SusD-like_3
TC k141_165182 k141_165182_39 62231 66187 + 9.A.25.1.1
CAZyme k141_165182 k141_165182_40 66225 67748 + PL29
Gene ID: k141_165182_21
Type: TC
Location: 27029 - 27889 (+)
Gene ID: k141_165182_22
Type: CAZyme
Location: 27993 - 30209 (+)
Gene ID: k141_165182_23
Type: peptidase
Location: 30348 - 31346 (+)
Gene ID: k141_165182_24
Type: CAZyme
Location: 31426 - 32289 (-)
Gene ID: k141_165182_25
Type: TC
Location: 32426 - 34684 (+)
Gene ID: k141_165182_26
Type: TC
Location: 34757 - 36355 (-)
Gene ID: k141_165182_27
Type: TC
Location: 36373 - 39813 (-)
Gene ID: k141_165182_28
Type: STP
Location: 40109 - 41077 (-)
Gene ID: k141_165182_29
Type: TF
Location: 41124 - 41741 (-)
Gene ID: k141_165182_30
Type: CAZyme
Location: 41927 - 44629 (+)
Gene ID: k141_165182_31
Type: CAZyme
Location: 44635 - 46947 (+)
Gene ID: k141_165182_32
Type: pfam
Location: 47052 - 47888 (+)
Gene ID: k141_165182_33
Type: CAZyme
Location: 48151 - 49317 (+)
Gene ID: k141_165182_34
Type: CAZyme
Location: 49369 - 50613 (+)
Gene ID: k141_165182_35
Type: CAZyme
Location: 50631 - 53099 (+)
Gene ID: k141_165182_36
Type: TF
Location: 53199 - 57317 (+)
Gene ID: k141_165182_37
Type: TC
Location: 57478 - 60615 (+)
Gene ID: k141_165182_38
Type: pfam
Location: 60640 - 62115 (+)
Gene ID: k141_165182_39
Type: TC
Location: 62231 - 66187 (+)
Gene ID: k141_165182_40
Type: CAZyme
Location: 66225 - 67748 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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