Cluster: CGMR030268_CGC77
🧬 Cluster Details
- Gene Count: 18
- CAZyme Count: 9
- Substrate:
- Genome ID: CGMR030268
- CGC Family ID: CGCFAM_01472
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_85914 | k141_85914_17 | 24881 | 27784 | - | GH2 |
| NULL(UNKNOWN) | k141_85914 | k141_85914_18 | 27797 | 30265 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_85914 | k141_85914_19 | 30402 | 31970 | - | SusD_RagB | SusD-like_3 |
| TC | k141_85914 | k141_85914_20 | 31983 | 35114 | - | 1.B.14.6.1 |
| pfam | k141_85914 | k141_85914_21 | 35612 | 35836 | - | DUF2007 |
| sulfatase | k141_85914 | k141_85914_22 | 35928 | 37451 | - | S1_20 |
| CAZyme | k141_85914 | k141_85914_23 | 37484 | 38857 | - | GH27 |
| pfam | k141_85914 | k141_85914_24 | 38938 | 40758 | - | SusD_RagB | SusD-like_3 |
| TC | k141_85914 | k141_85914_25 | 40774 | 44241 | - | 1.B.14.6.1 |
| STP | k141_85914 | k141_85914_26 | 44398 | 45393 | - | FecR |
| TF | k141_85914 | k141_85914_27 | 45584 | 46183 | + | GerE |
| CAZyme | k141_85914 | k141_85914_28 | 46259 | 48601 | - | GH3 |
| CAZyme | k141_85914 | k141_85914_29 | 48659 | 50044 | - | GH29 |
| CAZyme | k141_85914 | k141_85914_30 | 50271 | 52565 | - | GH95 |
| CAZyme | k141_85914 | k141_85914_31 | 52574 | 55957 | - | GH101 |
| CAZyme | k141_85914 | k141_85914_32 | 56122 | 59304 | - | GH2 |
| CAZyme | k141_85914 | k141_85914_33 | 59339 | 61480 | - | GH31_14 |
| CAZyme | k141_85914 | k141_85914_34 | 61728 | 65147 | - | GH2 |
Gene ID: k141_85914_17
Type: CAZyme
Location: 24881 - 27784 (-)
Type: CAZyme
Location: 24881 - 27784 (-)
Gene ID: k141_85914_18
Type:
Location: 27797 - 30265 (-)
Type:
Location: 27797 - 30265 (-)
Gene ID: k141_85914_19
Type: pfam
Location: 30402 - 31970 (-)
Type: pfam
Location: 30402 - 31970 (-)
Gene ID: k141_85914_20
Type: TC
Location: 31983 - 35114 (-)
Type: TC
Location: 31983 - 35114 (-)
Gene ID: k141_85914_21
Type: pfam
Location: 35612 - 35836 (-)
Type: pfam
Location: 35612 - 35836 (-)
Gene ID: k141_85914_22
Type: sulfatase
Location: 35928 - 37451 (-)
Type: sulfatase
Location: 35928 - 37451 (-)
Gene ID: k141_85914_23
Type: CAZyme
Location: 37484 - 38857 (-)
Type: CAZyme
Location: 37484 - 38857 (-)
Gene ID: k141_85914_24
Type: pfam
Location: 38938 - 40758 (-)
Type: pfam
Location: 38938 - 40758 (-)
Gene ID: k141_85914_25
Type: TC
Location: 40774 - 44241 (-)
Type: TC
Location: 40774 - 44241 (-)
Gene ID: k141_85914_26
Type: STP
Location: 44398 - 45393 (-)
Type: STP
Location: 44398 - 45393 (-)
Gene ID: k141_85914_27
Type: TF
Location: 45584 - 46183 (+)
Type: TF
Location: 45584 - 46183 (+)
Gene ID: k141_85914_28
Type: CAZyme
Location: 46259 - 48601 (-)
Type: CAZyme
Location: 46259 - 48601 (-)
Gene ID: k141_85914_29
Type: CAZyme
Location: 48659 - 50044 (-)
Type: CAZyme
Location: 48659 - 50044 (-)
Gene ID: k141_85914_30
Type: CAZyme
Location: 50271 - 52565 (-)
Type: CAZyme
Location: 50271 - 52565 (-)
Gene ID: k141_85914_31
Type: CAZyme
Location: 52574 - 55957 (-)
Type: CAZyme
Location: 52574 - 55957 (-)
Gene ID: k141_85914_32
Type: CAZyme
Location: 56122 - 59304 (-)
Type: CAZyme
Location: 56122 - 59304 (-)
Gene ID: k141_85914_33
Type: CAZyme
Location: 59339 - 61480 (-)
Type: CAZyme
Location: 59339 - 61480 (-)
Gene ID: k141_85914_34
Type: CAZyme
Location: 61728 - 65147 (-)
Type: CAZyme
Location: 61728 - 65147 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides chongii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.